Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   SPYKS030_RS02145 Genome accession   NZ_AP018337
Coordinates   405807..406532 (+) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain KS030     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 400807..411532
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPYKS030_RS02115 (SPYKS030_03620) - 400986..402446 (+) 1461 WP_032462143.1 NCS2 family permease -
  SPYKS030_RS02120 (SPYKS030_03630) tsaE 402600..403061 (+) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  SPYKS030_RS02125 (SPYKS030_03640) - 403036..403560 (+) 525 WP_002983369.1 GNAT family N-acetyltransferase -
  SPYKS030_RS02130 (SPYKS030_03650) brpA 403569..404852 (+) 1284 WP_002994335.1 biofilm formation/cell division transcriptional regulator BrpA -
  SPYKS030_RS02135 (SPYKS030_03660) - 404963..405319 (-) 357 WP_002988657.1 hypothetical protein -
  SPYKS030_RS02140 (SPYKS030_03670) - 405316..405735 (-) 420 WP_002983376.1 HIT family protein -
  SPYKS030_RS02145 (SPYKS030_03680) pptA 405807..406532 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  SPYKS030_RS02150 (SPYKS030_03690) - 406535..407569 (+) 1035 WP_010922583.1 ABC transporter permease -
  SPYKS030_RS02155 (SPYKS030_03700) ccrZ 407633..408424 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  SPYKS030_RS02160 (SPYKS030_03710) trmB 408424..409059 (+) 636 WP_120164360.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SPYKS030_RS02170 (SPYKS030_03720) rimP 409318..409854 (+) 537 WP_011054929.1 ribosome maturation factor RimP -
  SPYKS030_RS02175 (SPYKS030_03730) nusA 410029..411186 (+) 1158 WP_002994325.1 transcription termination factor NusA -
  SPYKS030_RS02180 (SPYKS030_03740) rnpM 411202..411498 (+) 297 WP_002983486.1 RNase P modulator RnpM -

Sequence


Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=68984 SPYKS030_RS02145 WP_002983379.1 405807..406532(+) (pptA) [Streptococcus pyogenes strain KS030]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=68984 SPYKS030_RS02145 WP_002983379.1 405807..406532(+) (pptA) [Streptococcus pyogenes strain KS030]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722

  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714


Multiple sequence alignment