Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   OTU47_RS04755 Genome accession   NZ_CP113115
Coordinates   877421..878131 (-) Length   236 a.a.
NCBI ID   WP_000760673.1    Uniprot ID   A0A0H2URH4
Organism   Streptococcus pneumoniae strain NP2     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 872421..883131
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OTU47_RS04735 (OTU47_04735) amiD 872926..873852 (+) 927 WP_000103700.1 oligopeptide ABC transporter permease OppC Regulator
  OTU47_RS04740 (OTU47_04740) amiE 873861..874928 (+) 1068 WP_000159554.1 ABC transporter ATP-binding protein Regulator
  OTU47_RS04745 (OTU47_04745) - 874939..875865 (+) 927 WP_001291293.1 ATP-binding cassette domain-containing protein -
  OTU47_RS04750 (OTU47_04750) - 875940..877266 (-) 1327 Protein_884 ISL3 family transposase -
  OTU47_RS04755 (OTU47_04755) treR 877421..878131 (-) 711 WP_000760673.1 trehalose operon repressor Regulator
  OTU47_RS04760 (OTU47_04760) treP 878316..880283 (+) 1968 WP_000514351.1 PTS system trehalose-specific EIIBC component -
  OTU47_RS04765 (OTU47_04765) treC 880461..882086 (+) 1626 WP_000171212.1 alpha,alpha-phosphotrehalase -
  OTU47_RS04770 (OTU47_04770) - 882342..882590 (+) 249 WP_000364990.1 YneF family protein -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27607.78 Da        Isoelectric Point: 8.9698

>NTDB_id=689802 OTU47_RS04755 WP_000760673.1 877421..878131(-) (treR) [Streptococcus pneumoniae strain NP2]
MKKYQQLFKQIQETIQNETYAVGDFLPSEHDLMEQYQVSRDTVRKALSLLQEEGLIKKIRGQGSQVVKEETVNFPVSNLT
SYQELVKELGLRSKTNVVSLDKIIIDKKSSLITGFPEFRMVWKVVRQRVVDDLVSVLDTDYLDMELIPNLTRQIAEQSIY
SYIENGLKLLIDYAQKEITIDHSSDRDKILMDIGKDPYVVSIKSKVYLQDGRQFQFTESRHKLEKFRFVDFAKRKK

Nucleotide


Download         Length: 711 bp        

>NTDB_id=689802 OTU47_RS04755 WP_000760673.1 877421..878131(-) (treR) [Streptococcus pneumoniae strain NP2]
ATGAAGAAATACCAACAATTATTTAAGCAAATCCAAGAAACCATTCAAAACGAGACTTACGCTGTCGGAGATTTCCTTCC
TAGCGAGCACGACCTTATGGAGCAATATCAAGTGAGTCGTGATACCGTCCGAAAGGCCCTGTCTCTCCTCCAAGAGGAAG
GATTGATCAAAAAGATAAGAGGGCAAGGTTCTCAAGTCGTCAAAGAAGAAACCGTCAATTTCCCTGTATCCAACCTAACC
AGCTACCAAGAACTAGTTAAAGAACTTGGACTGCGCTCTAAAACCAACGTGGTCAGTCTGGACAAGATTATTATTGATAA
AAAATCCTCACTGATAACCGGTTTCCCAGAGTTTCGGATGGTTTGGAAGGTGGTCCGCCAGCGTGTGGTGGATGATCTGG
TATCCGTTCTGGATACGGACTATCTGGATATGGAACTAATCCCAAATCTCACTCGCCAAATTGCTGAGCAGTCTATCTAT
TCTTATATAGAAAATGGCCTCAAACTCCTTATTGATTATGCTCAGAAGGAAATCACCATTGACCACTCAAGCGACCGAGA
CAAGATTCTCATGGACATTGGCAAAGACCCTTATGTCGTTTCGATTAAATCAAAAGTCTATCTCCAAGACGGACGCCAAT
TTCAGTTTACCGAAAGTCGCCATAAGTTAGAAAAATTTAGATTTGTAGATTTTGCAAAACGCAAGAAATAA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(89-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2URH4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

59.322

100

0.593