Detailed information NTG0689601

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: M8X21_RS01950
• Genome accession: NZ_CP097467
• Coordinates: 388277..389425 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain HMB26553
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 383277..394425

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M8X21_RS01930 (M8X21_01930)	-	383677..384360 (-)	684	WP_014416899.1	ABC transporter ATP-binding protein	-
M8X21_RS01935 (M8X21_01935)	-	384375..385808 (-)	1434	WP_029974314.1	ABC transporter permease	-
M8X21_RS01940 (M8X21_01940)	-	386021..386704 (+)	684	WP_014416901.1	response regulator transcription factor	-
M8X21_RS01945 (M8X21_01945)	-	386691..388124 (+)	1434	WP_103042081.1	HAMP domain-containing sensor histidine kinase	-
M8X21_RS01950 (M8X21_01950)	rapC	388277..389425 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
M8X21_RS01955 (M8X21_01955)	phrC	389409..389528 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
M8X21_RS01960 (M8X21_01960)	-	389676..389771 (-)	96	WP_021495118.1	YjcZ family sporulation protein	-
M8X21_RS01965 (M8X21_01965)	-	389866..391230 (-)	1365	WP_015239155.1	aspartate kinase	-
M8X21_RS01970 (M8X21_01970)	ceuB	391644..392597 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
M8X21_RS01975 (M8X21_01975)	-	392587..393534 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
M8X21_RS01980 (M8X21_01980)	-	393528..394286 (+)	759	WP_012116804.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=689601 M8X21_RS01950 WP_007410270.1 388277..389425(+) (rapC) [Bacillus velezensis strain HMB26553]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=689601 M8X21_RS01950 WP_007410270.1 388277..389425(+) (rapC) [Bacillus velezensis strain HMB26553]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTATACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568