Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   M5524_RS26175 Genome accession   NZ_CP097466
Coordinates   5905188..5905583 (-) Length   131 a.a.
NCBI ID   WP_373988949.1    Uniprot ID   -
Organism   Duganella sp. BuS-21     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5900188..5910583
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M5524_RS26160 (M5524_26115) - 5901948..5904269 (-) 2322 WP_373988946.1 methyl-accepting chemotaxis protein -
  M5524_RS26165 (M5524_26120) - 5904295..5904801 (-) 507 WP_373988947.1 chemotaxis protein CheW -
  M5524_RS26170 (M5524_26125) - 5904804..5905169 (-) 366 WP_373988948.1 response regulator transcription factor -
  M5524_RS26175 (M5524_26130) pilG 5905188..5905583 (-) 396 WP_373988949.1 PleD family two-component system response regulator Regulator
  M5524_RS26180 (M5524_26135) - 5905609..5905800 (-) 192 WP_301547057.1 rubredoxin -
  M5524_RS26185 (M5524_26140) - 5905857..5906711 (+) 855 WP_373988950.1 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase -
  M5524_RS26190 (M5524_26145) hemL 5906731..5908017 (+) 1287 WP_373988951.1 glutamate-1-semialdehyde 2,1-aminomutase -
  M5524_RS26195 (M5524_26150) - 5908091..5909413 (-) 1323 WP_373988952.1 nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14141.43 Da        Isoelectric Point: 7.3213

>NTDB_id=689587 M5524_RS26175 WP_373988949.1 5905188..5905583(-) (pilG) [Duganella sp. BuS-21]
MTTTALKIMVIDDSSTIRRSAEIFLTQAGYQVVLADDGFDALAKINDHHPALIFCDILMPRLDGYQTCALIKKSAKFHAT
PVLMLSSKDGLFDRARGAMVGAVAYLTKPFTKDSLLAAVREHTGGAVATPE

Nucleotide


Download         Length: 396 bp        

>NTDB_id=689587 M5524_RS26175 WP_373988949.1 5905188..5905583(-) (pilG) [Duganella sp. BuS-21]
ATGACGACAACCGCGCTGAAAATCATGGTGATCGACGACAGCAGCACGATTCGTCGTTCGGCCGAGATCTTTTTGACCCA
GGCCGGCTATCAGGTGGTGCTGGCCGACGACGGCTTCGACGCCCTGGCCAAGATCAACGACCACCATCCGGCGCTGATCT
TCTGCGACATCCTGATGCCGCGCCTCGATGGCTATCAAACCTGCGCCCTGATCAAAAAAAGCGCAAAATTCCATGCCACG
CCGGTGTTGATGCTGTCCTCCAAGGACGGCTTGTTCGACCGCGCGCGCGGCGCCATGGTCGGCGCGGTCGCCTATCTGAC
CAAGCCGTTTACCAAAGACAGCCTGCTGGCCGCCGTTCGCGAGCACACCGGCGGCGCTGTCGCCACACCAGAATAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(8-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

62.393

89.313

0.557