Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   OSZ56_RS09110 Genome accession   NZ_CP113105
Coordinates   1877996..1878796 (-) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain BIAI 117     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1872996..1883796
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OSZ56_RS09095 (OSZ56_09095) - 1873588..1874484 (-) 897 WP_256083458.1 AAA family ATPase -
  OSZ56_RS09100 (OSZ56_09100) rlmH 1874604..1875083 (-) 480 WP_267810176.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  OSZ56_RS09105 (OSZ56_09105) adsA 1875451..1877769 (-) 2319 WP_115306959.1 LPXTG-anchored adenosine synthase AdsA -
  OSZ56_RS09110 (OSZ56_09110) vicX 1877996..1878796 (-) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  OSZ56_RS09115 (OSZ56_09115) - 1879184..1879972 (-) 789 WP_001104171.1 two-component system regulatory protein YycI -
  OSZ56_RS09120 (OSZ56_09120) yycH 1879973..1881307 (-) 1335 WP_001060146.1 two-component system activity regulator YycH -
  OSZ56_RS09125 (OSZ56_09125) walK 1881300..1883126 (-) 1827 WP_000871610.1 cell wall metabolism sensor histidine kinase WalK -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=689502 OSZ56_RS09110 WP_000088649.1 1877996..1878796(-) (vicX) [Staphylococcus aureus strain BIAI 117]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=689502 OSZ56_RS09110 WP_000088649.1 1877996..1878796(-) (vicX) [Staphylococcus aureus strain BIAI 117]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACGAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCGATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGTGATGCGTTTATTTTTGAAAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACCTATCGCATTTATCACAAGATAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474