Detailed information NTG0689409

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: OSU72_RS19530
• Genome accession: NZ_CP113103
• Coordinates: 4437994..4439010 (-)
• Length: 338 a.a.
• NCBI ID: WP_010642932.1
• Uniprot ID: A0ABR4S4R0
• Organism: Streptomyces sp. NA13
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4432994..4444010

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OSU72_RS19495 (OSU72_19495)	-	4433251..4433703 (+)	453	WP_266920953.1	hypothetical protein	-
OSU72_RS19500 (OSU72_19500)	-	4433857..4434690 (+)	834	WP_026048337.1	MurR/RpiR family transcriptional regulator	-
OSU72_RS19505 (OSU72_19505)	-	4434867..4435406 (+)	540	WP_267813585.1	hypothetical protein	-
OSU72_RS19510 (OSU72_19510)	-	4435449..4435823 (-)	375	WP_003950372.1	hypothetical protein	-
OSU72_RS19515 (OSU72_19515)	-	4435880..4436389 (-)	510	WP_008417684.1	roadblock/LC7 domain-containing protein	-
OSU72_RS19520 (OSU72_19520)	-	4436428..4437183 (-)	756	WP_266920947.1	transcriptional regulator	-
OSU72_RS19525 (OSU72_19525)	-	4437234..4437644 (-)	411	WP_175509559.1	hypothetical protein	-
OSU72_RS19530 (OSU72_19530)	cytR	4437994..4439010 (-)	1017	WP_010642932.1	LacI family DNA-binding transcriptional regulator	Regulator
OSU72_RS19535 (OSU72_19535)	-	4439327..4440637 (+)	1311	WP_267812739.1	ABC transporter substrate-binding protein	-
OSU72_RS19540 (OSU72_19540)	-	4440745..4441740 (+)	996	WP_420719935.1	carbohydrate ABC transporter permease	-
OSU72_RS19545 (OSU72_19545)	-	4441755..4442690 (+)	936	WP_003950379.1	carbohydrate ABC transporter permease	-

Sequence

Protein

• Length: 338 a.a.
• Molecular weight: 36089.80 Da
• Isoelectric Point: 5.2972

>NTDB_id=689409 OSU72_RS19530 WP_010642932.1 4437994..4439010(-) (cytR) [Streptomyces sp. NA13]
MGSRQRPTIKTVAARAGVGRTTVSRVINGSELVSDEARTAVLAAIAELNYVPNSVARGLVTSRTDSVALVIPESESRLGS
EPYFSAVIRGVSTGLTERRIQLQLVLVRDQAERDQLTESVAERRVDGVLLVSVHEQDPLPGLLENMGLPTVLAGRRAHGE
PLSHVRADNEGGAAAAVAHLVARGRRRIATISGPLDMDVSRSRLDGWRDALRDEGVEAAETLVATADFTEAGGEAAMRSL
LERDPGLDAVFAASDVMAAGALAELRRQGRRVPDDVALIGFDDSVIARHSNPPLTSVRQPVEAIGRTMAQILLAEIDDPG
QPRQHVVLPTELVVRESS

Nucleotide

• Length: 1017 bp

>NTDB_id=689409 OSU72_RS19530 WP_010642932.1 4437994..4439010(-) (cytR) [Streptomyces sp. NA13]
ATGGGCAGCAGGCAACGCCCGACGATCAAGACCGTCGCCGCGCGTGCGGGCGTGGGACGGACCACGGTCTCCCGCGTCAT
CAACGGTTCGGAGCTGGTCAGCGACGAGGCCAGGACGGCCGTGCTCGCCGCCATCGCGGAGCTGAACTACGTGCCCAACT
CGGTCGCGCGGGGGCTGGTGACCAGCAGGACGGACTCCGTCGCCCTGGTCATCCCCGAGTCGGAGAGCCGGCTGGGCTCG
GAGCCCTACTTCTCCGCCGTCATCCGCGGCGTCAGCACCGGTCTCACCGAGCGGCGGATCCAGCTCCAACTGGTCCTCGT
ACGCGACCAGGCCGAGCGCGACCAGCTCACCGAGTCGGTCGCCGAGCGCCGGGTGGATGGGGTGCTGCTGGTCTCGGTGC
ACGAGCAGGACCCGCTGCCGGGCCTGCTGGAGAACATGGGGCTGCCCACCGTCCTCGCCGGCCGGCGCGCCCACGGCGAG
CCGCTCAGCCATGTCCGCGCCGACAACGAGGGCGGGGCCGCGGCGGCCGTCGCCCACCTGGTGGCCCGGGGGCGGCGCCG
GATCGCCACCATCAGCGGGCCCCTCGACATGGACGTGTCGCGCAGCCGCCTCGACGGCTGGCGGGACGCCCTGCGGGACG
AGGGCGTCGAGGCGGCGGAGACGCTGGTGGCCACCGCCGACTTCACCGAGGCCGGCGGCGAGGCCGCGATGCGTTCACTA
CTTGAACGCGATCCGGGTCTGGACGCGGTGTTCGCCGCCTCGGACGTCATGGCGGCCGGCGCCCTGGCGGAACTGCGCCG
CCAGGGCCGGCGGGTCCCCGACGACGTGGCGCTGATCGGCTTCGACGACTCCGTCATCGCCCGGCACAGCAACCCGCCCC
TCACCAGCGTGCGCCAGCCGGTCGAGGCGATCGGCCGCACGATGGCCCAGATCCTCCTGGCGGAGATCGACGACCCCGGA
CAGCCTCGGCAGCACGTCGTCCTGCCGACGGAACTCGTCGTACGGGAGTCCTCCTGA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (8-53)

• Periplasmic binding protein-like domain (Peripla_BP_3) (177-338)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	35.817	100	0.37