Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   OSU72_RS07385 Genome accession   NZ_CP113103
Coordinates   1760424..1762157 (-) Length   577 a.a.
NCBI ID   WP_267811796.1    Uniprot ID   -
Organism   Streptomyces sp. NA13     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1755424..1767157
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OSU72_RS07370 (OSU72_07370) rpoS 1757112..1758185 (+) 1074 WP_008405566.1 RNA polymerase sigma factor Regulator
  OSU72_RS07375 (OSU72_07375) - 1758202..1758417 (-) 216 WP_003947903.1 hypothetical protein -
  OSU72_RS07380 (OSU72_07380) rcrQ 1758508..1760424 (-) 1917 WP_267811795.1 ABC transporter ATP-binding protein Regulator
  OSU72_RS07385 (OSU72_07385) rcrP 1760424..1762157 (-) 1734 WP_267811796.1 ABC transporter ATP-binding protein Regulator
  OSU72_RS07390 (OSU72_07390) - 1762291..1763745 (-) 1455 WP_008405577.1 xylulokinase -
  OSU72_RS07395 (OSU72_07395) - 1763835..1764134 (-) 300 WP_003947907.1 hypothetical protein -
  OSU72_RS07415 (OSU72_07415) - 1764842..1765294 (-) 453 WP_267811797.1 hypothetical protein -
  OSU72_RS07420 (OSU72_07420) - 1765376..1766260 (-) 885 WP_267811798.1 hypothetical protein -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 62619.92 Da        Isoelectric Point: 5.6287

>NTDB_id=689386 OSU72_RS07385 WP_267811796.1 1760424..1762157(-) (rcrP) [Streptomyces sp. NA13]
MLIRLLRTYLRPYQKPIALVMVLQLLQTCAALYLPSLNADIIDRGVVRGDTGVILGLGAVMLAVTLVQMAGNIGAVYFGA
RTAAALGRDVRAAVFDRVQSFSARELNGFGAPSLITRTTNDVQQVQMLALMTFTLMVTAPIMCVGGVIMALGQDVPLSGV
LLAVLPVMAASVGMVVWRLRPLFRSMQKRLDTVNRVLREQITGNRVIRAFVRDRYETERFGRANTDLTEVSLGTGRLLAL
MFPLVMLVVNLSSLAVVWFGAHRIDSGAMEIGSLTAFLAYLMQIVMSVMMATFMFMMVPRAEVCAERIQEVLGTSSSVVP
PAEPVRELAGRGTLEMRAAGFRYPGAEEWVLRDVELFAGPGETTAVIGSTGSGKTTLLGLAARLIDPVEGEVLVDGVDIR
RIDPALLARTVGLVPQKPYLFSGTVASNLRYGNPEASDEELWHALEVAQAKEFVERLEGGLEAPVSQGGTNVSGGQRQRL
AIARTLVQRPEIYLFDDSFSALDYATDAALRAALRAETAEAGVVIVAQRVSTIRDADRIVVLDEGRVVAVGRHHDLMERD
ETYREIVLSQLTEAEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=689386 OSU72_RS07385 WP_267811796.1 1760424..1762157(-) (rcrP) [Streptomyces sp. NA13]
GTGCTCATACGACTCCTGCGGACGTATCTGCGTCCGTACCAGAAACCCATCGCGCTGGTGATGGTGCTCCAACTGCTCCA
GACCTGCGCGGCCCTGTACCTTCCGTCGCTCAACGCGGACATCATCGACCGGGGCGTCGTGCGGGGCGACACGGGCGTCA
TCCTCGGGCTCGGCGCCGTCATGCTGGCGGTCACGCTGGTGCAGATGGCGGGCAACATCGGCGCCGTCTACTTCGGCGCC
CGGACCGCCGCCGCCCTCGGCCGGGACGTGCGGGCGGCCGTCTTCGACCGGGTGCAGTCCTTCTCGGCACGGGAGCTGAA
CGGCTTCGGGGCACCGTCCCTGATCACCCGGACCACCAACGACGTCCAGCAGGTCCAGATGCTGGCCCTGATGACCTTCA
CGCTGATGGTGACGGCGCCCATCATGTGCGTGGGCGGCGTGATCATGGCGCTGGGCCAGGACGTACCGCTCTCCGGGGTG
CTGCTGGCGGTGCTGCCCGTGATGGCGGCCTCGGTCGGCATGGTCGTCTGGCGGCTGCGGCCGCTCTTCCGCTCCATGCA
GAAGCGGCTGGACACCGTCAACCGGGTGCTGCGGGAGCAGATCACCGGCAACCGCGTCATCCGCGCCTTCGTCCGCGACC
GGTACGAGACCGAGCGGTTCGGCCGGGCCAACACCGACCTGACCGAGGTCTCGCTGGGCACCGGCCGGCTGCTGGCGCTG
ATGTTCCCGCTGGTGATGCTGGTGGTGAACCTGTCCTCGCTGGCCGTGGTCTGGTTCGGCGCCCACCGGATCGACAGCGG
CGCGATGGAGATCGGCTCGCTCACCGCCTTCCTCGCCTACCTGATGCAGATCGTCATGTCCGTGATGATGGCCACCTTCA
TGTTCATGATGGTGCCGCGCGCCGAGGTGTGCGCCGAGCGCATCCAGGAGGTGCTGGGGACGAGCAGCAGCGTCGTCCCG
CCCGCCGAGCCGGTCCGCGAACTGGCCGGCCGGGGCACGCTGGAGATGCGGGCCGCGGGGTTCCGCTACCCGGGCGCCGA
GGAGTGGGTCCTGCGCGACGTGGAGCTGTTCGCCGGGCCCGGCGAGACCACCGCCGTCATCGGCTCGACCGGCTCCGGCA
AGACCACCCTGCTCGGCCTCGCCGCCCGCCTGATCGACCCCGTGGAGGGCGAGGTGCTGGTCGACGGCGTCGACATCCGC
CGGATCGACCCGGCGCTGCTGGCCCGCACCGTCGGCCTCGTCCCGCAGAAGCCGTACCTCTTCTCCGGCACCGTGGCGAG
CAACCTGCGGTACGGCAACCCGGAGGCGAGTGACGAGGAGCTGTGGCACGCGTTGGAGGTGGCGCAGGCCAAGGAGTTCG
TCGAGCGGCTGGAAGGCGGGCTGGAGGCTCCCGTCTCGCAGGGCGGGACCAACGTCTCGGGCGGTCAGCGCCAGCGGCTC
GCCATCGCGCGGACCCTGGTGCAGCGCCCCGAGATCTACCTCTTCGACGACTCGTTCTCGGCGCTGGACTACGCGACCGA
CGCGGCGCTGCGGGCAGCCCTGCGCGCGGAGACCGCCGAGGCGGGCGTGGTGATCGTCGCCCAGCGGGTGTCGACCATCC
GGGACGCCGACCGGATCGTCGTCCTCGACGAGGGCCGGGTGGTGGCGGTCGGCCGCCACCACGACCTGATGGAACGGGAC
GAGACCTACCGGGAGATCGTGCTCTCCCAGCTGACGGAAGCGGAGGCCGCGTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(351-498)

ABC transporter transmembrane region (ABC_membrane)

(18-288)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

38.112

99.133

0.378