Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   M6G44_RS07045 Genome accession   NZ_CP097377
Coordinates   1522696..1522989 (-) Length   97 a.a.
NCBI ID   WP_005598477.1    Uniprot ID   A3N205
Organism   Actinobacillus pleuropneumoniae strain GD2107     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1517696..1527989
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M6G44_RS07015 (M6G44_07015) artM 1518028..1518711 (-) 684 WP_005605188.1 arginine ABC transporter permease ArtM -
  M6G44_RS07020 (M6G44_07020) artQ 1518711..1519382 (-) 672 WP_005617821.1 arginine ABC transporter permease ArtQ -
  M6G44_RS07025 (M6G44_07025) - 1519388..1520107 (-) 720 WP_012478527.1 transporter substrate-binding domain-containing protein -
  M6G44_RS07030 (M6G44_07030) artP 1520127..1520861 (-) 735 WP_005598473.1 arginine ABC transporter ATP-binding protein ArtP -
  M6G44_RS07035 (M6G44_07035) - 1521086..1521583 (-) 498 WP_005617825.1 YbhB/YbcL family Raf kinase inhibitor-like protein -
  M6G44_RS07040 (M6G44_07040) - 1521656..1522618 (+) 963 WP_012478528.1 calcium/sodium antiporter -
  M6G44_RS07045 (M6G44_07045) HI0659 1522696..1522989 (-) 294 WP_005598477.1 helix-turn-helix domain-containing protein Machinery gene
  M6G44_RS07050 (M6G44_07050) - 1522970..1523341 (-) 372 WP_005619674.1 type II toxin-antitoxin system RelE/ParE family toxin -
  M6G44_RS07055 (M6G44_07055) - 1523535..1525286 (+) 1752 WP_237601096.1 protein-disulfide reductase DsbD -
  M6G44_RS07060 (M6G44_07060) - 1525344..1525913 (+) 570 WP_005608594.1 elongation factor P hydroxylase -
  M6G44_RS07065 (M6G44_07065) rsmI 1525957..1526811 (-) 855 WP_005615766.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -

Sequence

Protein


Download         Length: 97 a.a.        Molecular weight: 10935.81 Da        Isoelectric Point: 10.3120

>NTDB_id=689324 M6G44_RS07045 WP_005598477.1 1522696..1522989(-) (HI0659) [Actinobacillus pleuropneumoniae strain GD2107]
MSPIGSSWTSFEQEIFDESEIAETQFRIRLILEIIETRQQLGISQRKLEKLSGVKQSMIARVEKGSVNPSLATVLKLLVP
LGKTLQIVPLDKNKTVR

Nucleotide


Download         Length: 294 bp        

>NTDB_id=689324 M6G44_RS07045 WP_005598477.1 1522696..1522989(-) (HI0659) [Actinobacillus pleuropneumoniae strain GD2107]
ATGAGCCCTATTGGTTCTAGTTGGACATCGTTTGAACAAGAAATTTTTGACGAGTCGGAAATAGCGGAAACTCAGTTTCG
CATACGACTTATTTTAGAAATCATTGAAACCCGTCAGCAGCTCGGTATCTCTCAACGAAAATTGGAGAAATTAAGCGGCG
TAAAACAATCTATGATTGCTCGGGTAGAAAAAGGCTCGGTTAATCCGTCGTTGGCGACGGTATTAAAGTTGCTTGTGCCG
TTGGGGAAAACTTTACAAATCGTACCGTTAGATAAAAACAAAACGGTACGTTAA

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(35-86)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3N205

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

66.667

92.784

0.619