Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   M5E03_RS07145 Genome accession   NZ_CP097374
Coordinates   1393778..1394350 (+) Length   190 a.a.
NCBI ID   WP_024426871.1    Uniprot ID   -
Organism   Bacillus safensis strain AHB11     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1388778..1399350
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M5E03_RS07115 (M5E03_07115) dapD 1388894..1389604 (+) 711 WP_008347987.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  M5E03_RS07120 (M5E03_07120) - 1389686..1390816 (+) 1131 WP_034281599.1 N-acetyldiaminopimelate deacetylase -
  M5E03_RS07125 (M5E03_07125) - 1390867..1391109 (+) 243 WP_024424725.1 YkuS family protein -
  M5E03_RS07130 (M5E03_07130) - 1391132..1391941 (-) 810 WP_024424726.1 mechanosensitive ion channel family protein -
  M5E03_RS07135 (M5E03_07135) ahpA 1392213..1392755 (+) 543 WP_003211758.1 biofilm-specific peroxidase AhpA -
  M5E03_RS07140 (M5E03_07140) - 1392838..1393296 (+) 459 WP_024424727.1 TlpA family protein disulfide reductase -
  M5E03_RS07145 (M5E03_07145) rok 1393778..1394350 (+) 573 WP_024426871.1 transcriptional regulator Rok Regulator
  M5E03_RS07150 (M5E03_07150) - 1394399..1395316 (-) 918 WP_252050399.1 sigmaE regulated sporulation protein -
  M5E03_RS07155 (M5E03_07155) - 1395402..1395983 (+) 582 WP_046310811.1 molybdenum cofactor guanylyltransferase -
  M5E03_RS07160 (M5E03_07160) - 1396013..1397029 (+) 1017 WP_034281603.1 thiazole biosynthesis adenylyltransferase ThiF -
  M5E03_RS07165 (M5E03_07165) glp 1397039..1398316 (+) 1278 WP_034281604.1 gephyrin-like molybdotransferase Glp -
  M5E03_RS07170 (M5E03_07170) mobB 1398298..1398822 (+) 525 WP_081125261.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  M5E03_RS07175 (M5E03_07175) - 1398819..1399310 (+) 492 WP_034281605.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 190 a.a.        Molecular weight: 21543.50 Da        Isoelectric Point: 9.7309

>NTDB_id=689255 M5E03_RS07145 WP_024426871.1 1393778..1394350(+) (rok) [Bacillus safensis strain AHB11]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVSDTKKEVRTERKTDSLPVLAELAAQEMRSYQQ
PAQPQSSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTF
MQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 573 bp        

>NTDB_id=689255 M5E03_RS07145 WP_024426871.1 1393778..1394350(+) (rok) [Bacillus safensis strain AHB11]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAACGAGGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAGCGAGATGCGATTTATGCAAAATTAAGAGAATTAGACCGTCAAGGAACAGGTCTAGTGTCAGATACAAAAAAAG
AAGTACGTACAGAGAGAAAGACGGATTCACTGCCTGTATTAGCTGAGCTTGCTGCGCAAGAAATGAGAAGCTACCAGCAG
CCGGCACAACCACAATCATCATCTTTAGGAACAGGACAGCTAAACGGTGCGCCTGTAGGTATTCCGGAAGGATCGACAAG
ACGCAGAAGAGGCACAGCTCGTCCTGGCTCTAAGGCAGCGAAGCTTCGTGAAGCTGCGATTAAAACGTTAAAGCGTCATA
ATGCAGCGATTAAAAGCTCAGAGCTTCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATCCCAAATATGACAACGTTT
ATGCAAAGCTTAATTAAAATGTACCCTGAAGTGAAGAAGCCTTATCGCGGACAGTATATTTTAGAAGGCGACATTCAAAC
AGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

81.283

98.421

0.8