Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | M5E03_RS06835 | Genome accession | NZ_CP097374 |
| Coordinates | 1334531..1336633 (-) | Length | 700 a.a. |
| NCBI ID | WP_046310761.1 | Uniprot ID | - |
| Organism | Bacillus safensis strain AHB11 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1329531..1341633
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5E03_RS06810 (M5E03_06810) | - | 1329948..1330190 (+) | 243 | WP_024424676.1 | aspartyl-phosphate phosphatase Spo0E family protein | - |
| M5E03_RS06815 (M5E03_06815) | - | 1330237..1331742 (-) | 1506 | WP_252050384.1 | ATP-binding protein | - |
| M5E03_RS06820 (M5E03_06820) | - | 1331947..1332402 (+) | 456 | WP_034281539.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| M5E03_RS06825 (M5E03_06825) | motB | 1332596..1333366 (-) | 771 | WP_034281540.1 | flagellar motor protein MotB | - |
| M5E03_RS06830 (M5E03_06830) | motA | 1333359..1334153 (-) | 795 | WP_024424680.1 | flagellar motor stator protein MotA | - |
| M5E03_RS06835 (M5E03_06835) | clpC | 1334531..1336633 (-) | 2103 | WP_046310761.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| M5E03_RS06840 (M5E03_06840) | - | 1336878..1337921 (+) | 1044 | WP_034623360.1 | membrane protein | - |
| M5E03_RS06845 (M5E03_06845) | queC | 1338197..1338853 (+) | 657 | WP_046310763.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| M5E03_RS06850 (M5E03_06850) | queD | 1338854..1339294 (+) | 441 | WP_034281544.1 | 6-carboxytetrahydropterin synthase QueD | - |
| M5E03_RS06855 (M5E03_06855) | queE | 1339287..1340018 (+) | 732 | WP_034281545.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| M5E03_RS06860 (M5E03_06860) | queF | 1340034..1340531 (+) | 498 | WP_024426839.1 | preQ(1) synthase | - |
| M5E03_RS06865 (M5E03_06865) | - | 1341007..1341363 (-) | 357 | WP_061109758.1 | winged helix-turn-helix transcriptional regulator | - |
Sequence
Protein
Download Length: 700 a.a. Molecular weight: 77933.52 Da Isoelectric Point: 5.0332
>NTDB_id=689253 M5E03_RS06835 WP_046310761.1 1334531..1336633(-) (clpC) [Bacillus safensis strain AHB11]
MRCQHCQVNEATIRLNMQVNSSRSQMVLCEDCYTSLMEQSKMKMGPQLFGGSSFFSQAASHAPNMEQPKQKGLLDELGRN
LTDGANAGLIDPVIGRDEEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIASGDVPNKLKNKQIYLLDVSSLVA
NTGVRGQFEERMKQLIKELQSRKNIILFVDEIHLLVGAGSAEGSMDAGNILKPALARGELQLVGATTLKEYRQIEKDAAL
ERRFQPVIVDEPTQDEAIDILKGIQDKYEAYHGVSYSDEAIKACVQLSSRYIQDRHLPDKAIDLMDEAGSKANLSIDAAS
EDELTNRLAQIAAEKQAALKEEQYEKAAKLRDEEEAIEARLQNKTTEKEHIVTAEDIQAIVEQKTGIPVGKLQADEQTKM
KEIDVRLKARVIGQEHAVDKVAKAVKRSRAGLKSKHRPTGSFLFVGPTGVGKTELSKTLAEELFGSRDAIIRLDMSEYME
KHSVSKLIGSPPGYVGHDEAGQLTEKVRRKPYSIILLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN
AGSADKTVKVGFQSDQEEAIEEQSLIDSLSSYFKPEFLNRFDSIIQFESLDRDDLVKIVDLLLNELSEQLKEQNLTVHVT
NEAKEKIAELGYHPAFGARPLRRTIQEHVEDQMTEILLEEEQLSGFTVDVEHDEIVVKKG
MRCQHCQVNEATIRLNMQVNSSRSQMVLCEDCYTSLMEQSKMKMGPQLFGGSSFFSQAASHAPNMEQPKQKGLLDELGRN
LTDGANAGLIDPVIGRDEEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIASGDVPNKLKNKQIYLLDVSSLVA
NTGVRGQFEERMKQLIKELQSRKNIILFVDEIHLLVGAGSAEGSMDAGNILKPALARGELQLVGATTLKEYRQIEKDAAL
ERRFQPVIVDEPTQDEAIDILKGIQDKYEAYHGVSYSDEAIKACVQLSSRYIQDRHLPDKAIDLMDEAGSKANLSIDAAS
EDELTNRLAQIAAEKQAALKEEQYEKAAKLRDEEEAIEARLQNKTTEKEHIVTAEDIQAIVEQKTGIPVGKLQADEQTKM
KEIDVRLKARVIGQEHAVDKVAKAVKRSRAGLKSKHRPTGSFLFVGPTGVGKTELSKTLAEELFGSRDAIIRLDMSEYME
KHSVSKLIGSPPGYVGHDEAGQLTEKVRRKPYSIILLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN
AGSADKTVKVGFQSDQEEAIEEQSLIDSLSSYFKPEFLNRFDSIIQFESLDRDDLVKIVDLLLNELSEQLKEQNLTVHVT
NEAKEKIAELGYHPAFGARPLRRTIQEHVEDQMTEILLEEEQLSGFTVDVEHDEIVVKKG
Nucleotide
Download Length: 2103 bp
>NTDB_id=689253 M5E03_RS06835 WP_046310761.1 1334531..1336633(-) (clpC) [Bacillus safensis strain AHB11]
ATGCGTTGTCAACATTGTCAAGTAAATGAAGCAACTATTCGCCTGAATATGCAAGTAAATTCGTCCCGGAGCCAAATGGT
TTTATGTGAAGACTGCTATACCTCTTTGATGGAGCAGTCAAAAATGAAAATGGGACCTCAGCTTTTTGGAGGAAGTTCAT
TCTTCTCTCAGGCAGCAAGTCATGCCCCAAACATGGAGCAGCCAAAGCAAAAAGGCTTACTCGATGAGCTTGGCCGTAAC
TTAACAGATGGAGCAAATGCTGGTTTAATTGATCCAGTCATTGGCCGAGACGAAGAAGTCGCAAGAGTCATTGAGATTTT
AAATAGAAGAAATAAAAATAACCCTGTTCTTATTGGTGAACCAGGTGTTGGGAAAACAGCGATCGCAGAAGGACTCGCGC
TCAAAATTGCGAGCGGCGATGTGCCAAATAAATTAAAGAACAAACAAATCTATTTATTAGATGTCTCCTCACTTGTCGCA
AACACAGGTGTACGCGGTCAATTTGAGGAAAGAATGAAGCAGTTAATCAAAGAACTGCAAAGCCGTAAAAATATCATCTT
ATTTGTAGATGAAATCCACCTTCTTGTGGGCGCAGGATCTGCAGAAGGATCAATGGATGCTGGAAACATTTTAAAACCAG
CCCTTGCAAGAGGCGAGCTGCAGCTAGTAGGTGCGACGACATTAAAAGAATATCGCCAAATTGAAAAAGATGCTGCACTC
GAACGGCGCTTCCAGCCCGTTATCGTAGATGAGCCAACACAAGATGAAGCAATCGACATCTTAAAAGGCATTCAAGATAA
ATACGAGGCCTATCATGGTGTCTCCTATTCAGATGAAGCAATCAAAGCGTGCGTTCAATTATCTTCGCGGTATATTCAAG
ACCGTCATTTGCCGGATAAAGCCATTGATTTAATGGATGAAGCTGGTTCAAAAGCGAATCTCTCCATTGATGCAGCAAGT
GAAGATGAGCTGACAAACCGACTAGCGCAAATTGCCGCAGAAAAACAAGCTGCGCTAAAAGAAGAACAATATGAAAAAGC
AGCGAAGCTTCGCGATGAAGAAGAAGCCATTGAAGCAAGACTTCAAAACAAAACAACTGAAAAAGAGCATATCGTTACAG
CAGAGGACATTCAGGCCATTGTGGAACAAAAAACAGGCATTCCTGTCGGGAAACTCCAAGCAGACGAACAAACCAAAATG
AAAGAAATTGACGTCCGTCTAAAAGCACGAGTGATTGGACAGGAACATGCGGTTGATAAAGTGGCGAAAGCCGTGAAAAG
AAGCAGAGCTGGTTTAAAATCGAAACATAGACCAACAGGCTCCTTCCTTTTCGTTGGACCAACAGGTGTCGGGAAAACCG
AATTGTCTAAAACGTTAGCTGAAGAATTATTCGGTTCAAGAGATGCGATCATTCGTTTAGATATGAGTGAGTACATGGAA
AAACACTCTGTGTCCAAACTCATCGGTTCTCCTCCTGGTTACGTTGGACATGATGAAGCTGGCCAGCTGACTGAAAAAGT
GCGCAGAAAACCATACAGCATCATTTTGCTGGATGAAATCGAAAAAGCACACCCAGATGTACAGCACATGTTCCTGCAAA
TCATGGAAGATGGCCGCTTAACAGACAGCCAAGGCAGAACGGTCAGCTTTAAAGATACAGTCATCATCATGACAAGTAAC
GCAGGCAGCGCAGATAAAACGGTCAAGGTCGGCTTCCAGTCTGATCAGGAAGAAGCGATTGAGGAACAATCACTCATTGA
TTCACTAAGCAGCTACTTCAAACCAGAATTTTTGAACCGTTTTGACAGCATCATTCAGTTTGAATCATTAGACAGAGATG
ATTTAGTGAAGATTGTTGATCTTCTGCTCAATGAGCTGTCAGAGCAATTAAAAGAGCAGAATTTAACAGTCCATGTCACA
AATGAAGCGAAAGAAAAAATCGCAGAGCTTGGATATCACCCTGCATTTGGTGCTCGTCCACTTCGAAGAACCATCCAAGA
GCACGTTGAAGACCAAATGACGGAGATCCTGCTTGAAGAGGAGCAGCTTTCTGGATTTACTGTGGATGTTGAACATGACG
AAATCGTCGTAAAAAAAGGATAA
ATGCGTTGTCAACATTGTCAAGTAAATGAAGCAACTATTCGCCTGAATATGCAAGTAAATTCGTCCCGGAGCCAAATGGT
TTTATGTGAAGACTGCTATACCTCTTTGATGGAGCAGTCAAAAATGAAAATGGGACCTCAGCTTTTTGGAGGAAGTTCAT
TCTTCTCTCAGGCAGCAAGTCATGCCCCAAACATGGAGCAGCCAAAGCAAAAAGGCTTACTCGATGAGCTTGGCCGTAAC
TTAACAGATGGAGCAAATGCTGGTTTAATTGATCCAGTCATTGGCCGAGACGAAGAAGTCGCAAGAGTCATTGAGATTTT
AAATAGAAGAAATAAAAATAACCCTGTTCTTATTGGTGAACCAGGTGTTGGGAAAACAGCGATCGCAGAAGGACTCGCGC
TCAAAATTGCGAGCGGCGATGTGCCAAATAAATTAAAGAACAAACAAATCTATTTATTAGATGTCTCCTCACTTGTCGCA
AACACAGGTGTACGCGGTCAATTTGAGGAAAGAATGAAGCAGTTAATCAAAGAACTGCAAAGCCGTAAAAATATCATCTT
ATTTGTAGATGAAATCCACCTTCTTGTGGGCGCAGGATCTGCAGAAGGATCAATGGATGCTGGAAACATTTTAAAACCAG
CCCTTGCAAGAGGCGAGCTGCAGCTAGTAGGTGCGACGACATTAAAAGAATATCGCCAAATTGAAAAAGATGCTGCACTC
GAACGGCGCTTCCAGCCCGTTATCGTAGATGAGCCAACACAAGATGAAGCAATCGACATCTTAAAAGGCATTCAAGATAA
ATACGAGGCCTATCATGGTGTCTCCTATTCAGATGAAGCAATCAAAGCGTGCGTTCAATTATCTTCGCGGTATATTCAAG
ACCGTCATTTGCCGGATAAAGCCATTGATTTAATGGATGAAGCTGGTTCAAAAGCGAATCTCTCCATTGATGCAGCAAGT
GAAGATGAGCTGACAAACCGACTAGCGCAAATTGCCGCAGAAAAACAAGCTGCGCTAAAAGAAGAACAATATGAAAAAGC
AGCGAAGCTTCGCGATGAAGAAGAAGCCATTGAAGCAAGACTTCAAAACAAAACAACTGAAAAAGAGCATATCGTTACAG
CAGAGGACATTCAGGCCATTGTGGAACAAAAAACAGGCATTCCTGTCGGGAAACTCCAAGCAGACGAACAAACCAAAATG
AAAGAAATTGACGTCCGTCTAAAAGCACGAGTGATTGGACAGGAACATGCGGTTGATAAAGTGGCGAAAGCCGTGAAAAG
AAGCAGAGCTGGTTTAAAATCGAAACATAGACCAACAGGCTCCTTCCTTTTCGTTGGACCAACAGGTGTCGGGAAAACCG
AATTGTCTAAAACGTTAGCTGAAGAATTATTCGGTTCAAGAGATGCGATCATTCGTTTAGATATGAGTGAGTACATGGAA
AAACACTCTGTGTCCAAACTCATCGGTTCTCCTCCTGGTTACGTTGGACATGATGAAGCTGGCCAGCTGACTGAAAAAGT
GCGCAGAAAACCATACAGCATCATTTTGCTGGATGAAATCGAAAAAGCACACCCAGATGTACAGCACATGTTCCTGCAAA
TCATGGAAGATGGCCGCTTAACAGACAGCCAAGGCAGAACGGTCAGCTTTAAAGATACAGTCATCATCATGACAAGTAAC
GCAGGCAGCGCAGATAAAACGGTCAAGGTCGGCTTCCAGTCTGATCAGGAAGAAGCGATTGAGGAACAATCACTCATTGA
TTCACTAAGCAGCTACTTCAAACCAGAATTTTTGAACCGTTTTGACAGCATCATTCAGTTTGAATCATTAGACAGAGATG
ATTTAGTGAAGATTGTTGATCTTCTGCTCAATGAGCTGTCAGAGCAATTAAAAGAGCAGAATTTAACAGTCCATGTCACA
AATGAAGCGAAAGAAAAAATCGCAGAGCTTGGATATCACCCTGCATTTGGTGCTCGTCCACTTCGAAGAACCATCCAAGA
GCACGTTGAAGACCAAATGACGGAGATCCTGCTTGAAGAGGAGCAGCTTTCTGGATTTACTGTGGATGTTGAACATGACG
AAATCGTCGTAAAAAAAGGATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Lactococcus lactis subsp. cremoris KW2 |
56.64 |
100 |
0.597 |
| clpE | Streptococcus mutans UA159 |
56.334 |
100 |
0.597 |
| clpE | Streptococcus pneumoniae Rx1 |
55.525 |
100 |
0.574 |
| clpE | Streptococcus pneumoniae D39 |
55.525 |
100 |
0.574 |
| clpE | Streptococcus pneumoniae R6 |
55.525 |
100 |
0.574 |
| clpE | Streptococcus pneumoniae TIGR4 |
55.525 |
100 |
0.574 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
53.731 |
95.714 |
0.514 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
47.327 |
90.857 |
0.43 |
| clpC | Streptococcus thermophilus LMD-9 |
45.975 |
92.286 |
0.424 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.82 |
92.286 |
0.423 |
| clpC | Streptococcus pneumoniae TIGR4 |
44.513 |
92.429 |
0.411 |
| clpC | Streptococcus pneumoniae Rx1 |
44.704 |
91.714 |
0.41 |
| clpC | Streptococcus pneumoniae D39 |
44.704 |
91.714 |
0.41 |
| clpC | Streptococcus mutans UA159 |
44.15 |
91.571 |
0.404 |