Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   UtA1_RS01525 Genome accession   NZ_AP018335
Coordinates   313865..314818 (-) Length   317 a.a.
NCBI ID   WP_096549821.1    Uniprot ID   -
Organism   Ureibacillus thermosphaericus strain A1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 308865..319818
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  UtA1_RS01500 zupT 309156..309971 (-) 816 WP_096549816.1 zinc transporter ZupT -
  UtA1_RS01505 - 310151..310480 (-) 330 WP_096549817.1 phosphatase PAP2 family protein -
  UtA1_RS01510 - 310921..311949 (-) 1029 WP_096549818.1 siderophore ABC transporter substrate-binding protein -
  UtA1_RS01515 - 312155..312922 (-) 768 WP_096549819.1 ABC transporter ATP-binding protein -
  UtA1_RS01520 - 312919..313875 (-) 957 WP_096549820.1 iron chelate uptake ABC transporter family permease subunit -
  UtA1_RS01525 ceuB 313865..314818 (-) 954 WP_096549821.1 ABC transporter permease Machinery gene
  UtA1_RS01530 - 315170..316657 (-) 1488 WP_096549822.1 peptide MFS transporter -
  UtA1_RS01535 hflX 317007..318290 (-) 1284 WP_096549823.1 GTPase HflX -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34825.06 Da        Isoelectric Point: 9.6763

>NTDB_id=68923 UtA1_RS01525 WP_096549821.1 313865..314818(-) (ceuB) [Ureibacillus thermosphaericus strain A1]
MRLWMLIVAAIILSFISLFIGAIDIKPTDLLNWESQETQIFLISRVPRLLAIILAGAGMSIAGLIMQSLSRNKFVSPTTA
GTLDAAKLGILISILLFSQAAYMQKIIFSFVFAFAGTILFMQILDRIKFKDVIFVPLIGIMYGNILSSITTFFAYEGDLI
QNINTWLMGSFTLIISGRYELLYVSVPAIILAYLYANKFTVAGMGEDFAKNLGLSYKAVLNLGLILVATISTTVVLTVGV
IPFLGLVVPNIVSIYMGDNLRKTIPHTIVLGVVFLLVCDIIGRVVIYPYEIPVNVTVAVIGSLLFLIMLFRGRAYAK

Nucleotide


Download         Length: 954 bp        

>NTDB_id=68923 UtA1_RS01525 WP_096549821.1 313865..314818(-) (ceuB) [Ureibacillus thermosphaericus strain A1]
ATGAGACTATGGATGTTGATAGTAGCAGCAATCATCCTGTCATTCATTTCGCTATTCATTGGAGCAATCGATATAAAACC
TACTGATTTACTAAACTGGGAATCACAAGAAACTCAAATATTTCTAATTAGTAGGGTTCCTCGATTACTTGCCATTATTT
TAGCGGGTGCAGGAATGAGTATTGCTGGTTTAATTATGCAAAGTTTAAGTAGAAATAAGTTCGTATCACCTACGACAGCA
GGTACTCTAGATGCAGCTAAGTTAGGGATCCTTATTTCAATTTTGTTATTCTCACAAGCTGCATATATGCAAAAAATAAT
TTTTAGCTTTGTGTTTGCATTTGCAGGTACGATTTTATTTATGCAAATTTTAGACCGCATCAAATTTAAAGATGTGATTT
TCGTACCGTTAATCGGTATTATGTATGGAAATATTTTATCCTCCATTACGACGTTTTTTGCGTATGAAGGGGATTTGATT
CAAAACATAAATACTTGGTTAATGGGTAGTTTTACACTCATTATTTCAGGACGTTATGAGCTGTTATATGTAAGTGTTCC
TGCCATTATCTTGGCTTATTTATATGCGAATAAATTTACGGTTGCCGGAATGGGTGAAGACTTTGCAAAAAATTTAGGCT
TAAGTTACAAAGCTGTGTTGAACCTCGGTTTAATTCTTGTGGCGACCATTTCTACGACCGTTGTTTTAACAGTCGGTGTA
ATACCTTTTCTAGGTTTGGTTGTTCCGAATATTGTGTCAATCTATATGGGGGACAACTTACGTAAAACGATTCCACATAC
AATTGTACTGGGAGTTGTTTTCTTATTAGTCTGCGACATTATTGGTCGAGTAGTGATTTATCCATACGAAATACCGGTCA
ATGTAACAGTTGCAGTAATTGGTAGTTTGCTCTTCTTAATTATGTTGTTTAGGGGGAGAGCATATGCGAAATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.481

99.685

0.533

Multiple sequence alignment