Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   M5E02_RS06780 Genome accession   NZ_CP097373
Coordinates   1335181..1335753 (+) Length   190 a.a.
NCBI ID   WP_024426871.1    Uniprot ID   -
Organism   Bacillus safensis strain AHB2     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1330181..1340753
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M5E02_RS06750 (M5E02_06750) dapD 1330296..1331006 (+) 711 WP_095408367.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  M5E02_RS06755 (M5E02_06755) - 1331041..1332219 (+) 1179 WP_252057962.1 N-acetyldiaminopimelate deacetylase -
  M5E02_RS06760 (M5E02_06760) - 1332270..1332512 (+) 243 WP_024424725.1 YkuS family protein -
  M5E02_RS06765 (M5E02_06765) - 1332535..1333344 (-) 810 WP_024424726.1 mechanosensitive ion channel family protein -
  M5E02_RS06770 (M5E02_06770) ahpA 1333617..1334159 (+) 543 WP_003211758.1 biofilm-specific peroxidase AhpA -
  M5E02_RS06775 (M5E02_06775) - 1334242..1334700 (+) 459 WP_252057963.1 TlpA disulfide reductase family protein -
  M5E02_RS06780 (M5E02_06780) rok 1335181..1335753 (+) 573 WP_024426871.1 transcriptional regulator Rok Regulator
  M5E02_RS06785 (M5E02_06785) - 1335800..1336717 (-) 918 WP_252057964.1 sigmaE regulated sporulation protein -
  M5E02_RS06790 (M5E02_06790) - 1336803..1337384 (+) 582 WP_252057965.1 molybdenum cofactor guanylyltransferase -
  M5E02_RS06795 (M5E02_06795) - 1337414..1338430 (+) 1017 WP_252057966.1 thiazole biosynthesis adenylyltransferase ThiF -
  M5E02_RS06800 (M5E02_06800) glp 1338440..1339717 (+) 1278 WP_252057967.1 gephyrin-like molybdotransferase Glp -
  M5E02_RS06805 (M5E02_06805) mobB 1339699..1340223 (+) 525 WP_252057968.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  M5E02_RS06810 (M5E02_06810) - 1340220..1340711 (+) 492 WP_252057969.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 190 a.a.        Molecular weight: 21543.50 Da        Isoelectric Point: 9.7309

>NTDB_id=689195 M5E02_RS06780 WP_024426871.1 1335181..1335753(+) (rok) [Bacillus safensis strain AHB2]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVSDTKKEVRTERKTDSLPVLAELAAQEMRSYQQ
PAQPQSSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTF
MQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 573 bp        

>NTDB_id=689195 M5E02_RS06780 WP_024426871.1 1335181..1335753(+) (rok) [Bacillus safensis strain AHB2]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAATGAGGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAGCGCGATGCGATTTATGCAAAATTAAGAGAATTAGACCGTCAAGGAACAGGTCTAGTGTCAGATACAAAAAAAG
AAGTGCGTACAGAGAGAAAGACGGATTCACTGCCTGTATTAGCTGAGCTTGCTGCGCAAGAGATGAGAAGCTACCAGCAG
CCGGCACAACCACAATCATCTTCTTTAGGAACAGGGCAGCTAAACGGTGCACCTGTAGGTATTCCTGAAGGATCGACAAG
ACGCAGAAGAGGCACAGCCCGTCCTGGTTCAAAGGCAGCGAAGCTTCGTGAAGCTGCGATTAAAACGTTAAAGCGTCATA
ATGCAGCGATTAAAAGCTCAGAGCTTCAAAAAGAGATCGAAAAAGAGAGCGGTCTTGAAATCCCAAATATGACAACGTTT
ATGCAAAGTTTAATTAAAATGTACCCTGAAGTGAAGAAGCCTTATCGCGGACAGTATATTTTAGAAGGCGACATTCAAAC
AGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

81.283

98.421

0.8