Detailed information NTG0689192

Bioinformatically predicted

Overview

• Name: rpoN/rpoN1
• Type: Machinery gene
• Locus tag: OSV60_RS15100
• Genome accession: NZ_CP113077
• Coordinates: 3202488..3203936 (-)
• Length: 482 a.a.
• NCBI ID: WP_098714184.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain 86II/2C
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3197488..3208936

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OSV60_RS15075 (OSV60_15075)	hisD	3198250..3199539 (-)	1290	WP_001253725.1	histidinol dehydrogenase	-
OSV60_RS15080 (OSV60_15080)	hisG	3199645..3200328 (-)	684	WP_001000724.1	ATP phosphoribosyltransferase	-
OSV60_RS15085 (OSV60_15085)	murA	3200328..3201584 (-)	1257	WP_000357156.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
OSV60_RS15090 (OSV60_15090)	ibaG	3201591..3201842 (-)	252	WP_001083680.1	BolA family iron metabolism protein IbaG	-
OSV60_RS15095 (OSV60_15095)	hpf	3201981..3202319 (-)	339	WP_001167461.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
OSV60_RS15100 (OSV60_15100)	rpoN/rpoN1	3202488..3203936 (-)	1449	WP_098714184.1	RNA polymerase factor sigma-54	Machinery gene

Sequence

Protein

• Length: 482 a.a.
• Molecular weight: 55052.94 Da
• Isoelectric Point: 4.6620

>NTDB_id=689192 OSV60_RS15100 WP_098714184.1 3202488..3203936(-) (rpoN/rpoN1) [Acinetobacter baumannii strain 86II/2C]
MKLSVGLKVANSLSLTPQLQQAIRLLQLSSLELEQEIQIQLDSNPLLEKVEDESLAESLSTLEHKETDDLTTELNADHLP
DDLPVDTEWDDIYTHQSTALGTPEFEEREDNRQVHLTLKEHILEQVNLLHFSKIDQLIAYCIVDALDDKGFLDAELEEII
LAVQHLLSEMDIDEEVEEDEVLVVLKHIQRLDPIGIGARNLAECLKVQLEFLPRETEYLKEARSLLQYYELLIANDLNKL
LKQTGLSKEQLKFAVDLLKTLKPYPGMDFEKQESEYQIPDVVVAKKDLHWQVQLNPDVMPKLRINSFYSSMIRRADQSDD
NLYLRNQMLEAKNFIKSIDERHKTLLKVATCIVEHQKAFLEIGPEAMKPLVLRDVAEEVELHESTVSRVTTNKYMLTPRG
LFELKYFFSSHVGTTAGGEASSTAIRAMIKKLVSNENPRKPLSDNAIAALLKEEGIEVARRTVAKYRESLHIPSSSERKV
LI

Nucleotide

• Length: 1449 bp

>NTDB_id=689192 OSV60_RS15100 WP_098714184.1 3202488..3203936(-) (rpoN/rpoN1) [Acinetobacter baumannii strain 86II/2C]
ATGAAATTATCTGTTGGATTGAAAGTTGCGAATTCATTATCGTTAACGCCTCAATTGCAGCAGGCAATCCGTTTACTACA
ACTTTCTAGTCTAGAGTTAGAGCAAGAAATCCAAATTCAATTAGATAGTAATCCATTACTTGAAAAAGTAGAAGATGAAT
CACTAGCAGAAAGTTTATCTACTTTAGAACATAAAGAAACTGATGATCTTACAACAGAGTTGAATGCTGATCACTTACCT
GATGACTTGCCTGTTGATACTGAATGGGATGACATTTATACACATCAATCCACTGCTTTGGGTACTCCTGAGTTCGAAGA
GCGTGAAGATAATCGCCAAGTTCACCTGACGCTTAAAGAACATATTTTGGAGCAAGTGAACTTACTGCATTTTTCAAAAA
TAGATCAGTTGATTGCTTATTGCATAGTTGATGCTTTAGATGATAAAGGTTTTCTGGATGCTGAATTAGAAGAGATTATT
TTGGCAGTACAGCATTTATTAAGTGAGATGGATATAGACGAGGAAGTGGAAGAGGATGAGGTTTTAGTAGTCTTAAAACA
TATTCAACGTCTTGATCCAATTGGTATTGGAGCTCGTAATTTAGCTGAATGTTTAAAAGTTCAGTTGGAGTTCTTGCCTA
GAGAAACTGAATATTTGAAAGAAGCTAGAAGTCTACTTCAATATTACGAATTACTGATTGCGAATGATCTTAATAAATTA
TTGAAGCAAACAGGGCTTTCCAAGGAACAATTAAAATTTGCAGTTGATTTATTAAAAACATTAAAGCCTTATCCAGGCAT
GGATTTTGAAAAGCAAGAATCAGAATATCAAATTCCTGACGTAGTCGTTGCCAAGAAGGACTTGCATTGGCAAGTTCAGT
TAAATCCTGATGTAATGCCAAAATTAAGAATCAATTCTTTTTATTCGAGTATGATTCGTAGAGCTGATCAGAGCGATGAT
AATTTATATCTGCGTAATCAAATGCTTGAAGCCAAGAATTTTATAAAGAGTATCGATGAGCGACATAAAACTTTATTAAA
AGTGGCTACTTGTATTGTTGAGCATCAAAAAGCATTTCTTGAAATAGGTCCTGAAGCAATGAAGCCGTTAGTACTACGGG
ATGTTGCTGAAGAAGTGGAGTTACATGAGTCTACCGTTTCTCGGGTTACAACAAATAAATACATGCTGACTCCACGAGGA
CTTTTTGAGTTGAAATATTTCTTTTCTAGCCATGTTGGAACCACAGCTGGAGGGGAGGCTTCCTCTACCGCAATTCGGGC
AATGATTAAAAAGTTAGTTTCTAATGAAAATCCGCGTAAACCTTTGTCTGATAATGCAATTGCTGCTTTATTGAAAGAGG
AGGGAATAGAAGTAGCTAGAAGGACTGTAGCAAAATATAGAGAATCGTTACATATTCCATCGTCATCCGAGAGAAAAGTC
TTGATCTAA

Domains

Predicted by InterProScan.

• Sigma-54 factor, core binding domain (Sigma54_CBD) (111-308)

• Sigma-54, DNA binding domain (Sigma54_DBD) (323-479)

• Sigma-54 factor, Activator interacting domain (AID) (Sigma54_AID) (7-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoN/rpoN1	Ralstonia pseudosolanacearum GMI1000	43.137	100	0.456