Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   M5E02_RS05480 Genome accession   NZ_CP097373
Coordinates   1095624..1095821 (+) Length   65 a.a.
NCBI ID   WP_024425054.1    Uniprot ID   A0AAX0Z5U3
Organism   Bacillus safensis strain AHB2     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1090624..1100821
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M5E02_RS05450 (M5E02_05450) - 1091036..1091215 (+) 180 WP_008348517.1 YjzC family protein -
  M5E02_RS05455 (M5E02_05455) - 1091385..1092650 (+) 1266 WP_252057834.1 MFS transporter -
  M5E02_RS05460 (M5E02_05460) - 1092761..1092955 (-) 195 WP_003211779.1 YjzD family protein -
  M5E02_RS05465 (M5E02_05465) - 1093168..1093908 (+) 741 WP_048238467.1 hypothetical protein -
  M5E02_RS05470 (M5E02_05470) - 1093976..1094557 (+) 582 WP_252057835.1 nad binding enzyme -
  M5E02_RS05475 (M5E02_05475) med 1094649..1095611 (+) 963 WP_144470145.1 BMP family ABC transporter substrate-binding protein Regulator
  M5E02_RS05480 (M5E02_05480) comZ 1095624..1095821 (+) 198 WP_024425054.1 ComZ family protein Regulator
  M5E02_RS05485 (M5E02_05485) - 1095832..1096065 (-) 234 WP_048238471.1 hypothetical protein -
  M5E02_RS05490 (M5E02_05490) - 1096237..1097175 (+) 939 WP_024425052.1 beta-ketoacyl-ACP synthase III -
  M5E02_RS05495 (M5E02_05495) fabF 1097197..1098438 (+) 1242 WP_039177794.1 beta-ketoacyl-ACP synthase II -
  M5E02_RS05500 (M5E02_05500) - 1098516..1099319 (+) 804 WP_048238473.1 DUF2268 domain-containing protein -
  M5E02_RS05505 (M5E02_05505) - 1099469..1100449 (+) 981 WP_252057836.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7405.45 Da        Isoelectric Point: 4.1652

>NTDB_id=689187 M5E02_RS05480 WP_024425054.1 1095624..1095821(+) (comZ) [Bacillus safensis strain AHB2]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLEPEALQPLLTLFTSVMQEAYELGKADAESEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=689187 M5E02_RS05480 WP_024425054.1 1095624..1095821(+) (comZ) [Bacillus safensis strain AHB2]
ATGCAGCACGAAAAATCGATGGAATTTTTACAAATTGCCATGAAGTATTTTCCGCAGGCGAAGGAAGAGTTAGATAAAGC
AGGGATTCAGCTAGAGCCTGAAGCACTTCAGCCGCTTCTAACATTATTTACATCTGTCATGCAGGAAGCATACGAGCTTG
GAAAAGCAGATGCAGAATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

72.131

93.846

0.677