Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   M5E02_RS04115 Genome accession   NZ_CP097373
Coordinates   834689..835480 (+) Length   263 a.a.
NCBI ID   WP_024425221.1    Uniprot ID   -
Organism   Bacillus safensis strain AHB2     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 829689..840480
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M5E02_RS04080 (M5E02_04080) - 829775..830323 (+) 549 WP_252057699.1 thioredoxin family protein -
  M5E02_RS04085 (M5E02_04085) - 830656..831123 (+) 468 WP_252057700.1 DUF393 domain-containing protein -
  M5E02_RS04090 (M5E02_04090) - 831161..832417 (-) 1257 WP_252057701.1 transcriptional regulator -
  M5E02_RS04095 (M5E02_04095) - 832692..833279 (+) 588 WP_041087328.1 nitroreductase -
  M5E02_RS04100 (M5E02_04100) - 833318..833473 (-) 156 WP_041087330.1 YfhD family protein -
  M5E02_RS04105 (M5E02_04105) - 833535..833645 (-) 111 WP_017358836.1 YfhE family protein -
  M5E02_RS04110 (M5E02_04110) - 833698..834594 (-) 897 WP_048240069.1 TIGR01777 family oxidoreductase -
  M5E02_RS04115 (M5E02_04115) recX 834689..835480 (+) 792 WP_024425221.1 recombination regulator RecX Regulator
  M5E02_RS04120 (M5E02_04120) - 835484..835798 (+) 315 WP_047202061.1 YfhH family protein -
  M5E02_RS04125 (M5E02_04125) - 836024..836197 (-) 174 WP_008360604.1 YpzG family protein -
  M5E02_RS04130 (M5E02_04130) - 836223..836372 (-) 150 WP_003217849.1 small, acid-soluble spore protein K -
  M5E02_RS04135 (M5E02_04135) - 836489..836761 (+) 273 WP_122632173.1 YfhJ family protein -
  M5E02_RS04140 (M5E02_04140) - 837061..838044 (+) 984 WP_252057702.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30649.12 Da        Isoelectric Point: 6.6685

>NTDB_id=689179 M5E02_RS04115 WP_024425221.1 834689..835480(+) (recX) [Bacillus safensis strain AHB2]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDSVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKEIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDETIEQALSQYPDDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFEIIDKALQEAYDGQEEEKEEEALLYMLEKAKRKVGYDGSFEKKMK
VKQFLFRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=689179 M5E02_RS04115 WP_024425221.1 834689..835480(+) (recX) [Bacillus safensis strain AHB2]
ATGCCCTATATTACAAAAATTTCTGCTCAGAAAAACAATACCGAGCGGGTAAACATCTTTCTTGATGAAAAGTACGCCTT
TAGCGTTGATTTAGATGTGCTCGTCCAGCATGATTTGAAAAAAGGAAAAGAGCTCGACGAAGCAGATATCATTGAAATTC
AATTCGGTGATTCGGTGAAAAAAGGATTTCAGCAGGCCGTTGATTATTTATCCTACCGCATGAGATCAGTGAAAGAAGTC
ACCGATTATTTAACGAAAAAAGAAATCCCTGCACCTGCTATTAGTGAAATTATACACAAATTGAAGCATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCCTATGTCAGCACCCACCGAAAAACGAACAGTAAAGGACCGTCCGTCCTAAAAAAAG
AATTGAAGCTCAAGGGGATAGACGATGAAACGATTGAACAGGCGCTATCGCAATACCCTGATGACCTACAGCTCGAGGAA
GCCGTAAAGCAGGTTCTCAAGCTTGTCAAAAAAGAAAAAAATCGTTCTGCAAAAGAGATCGAGCAGCGCATCAAGCTGCA
GCTGCAGCGAAAGGGATTTTCGTTTGAGATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTCCTTTATATGCTGGAGAAGGCAAAACGCAAGGTAGGATATGACGGATCCTTTGAAAAAAAGATGAAA
GTGAAGCAATTTTTATTCAGAAAAGGCTTTGATCTCGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.498

100

0.635