Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   OSV60_RS05480 Genome accession   NZ_CP113077
Coordinates   1155462..1156403 (+) Length   313 a.a.
NCBI ID   WP_001159458.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain 86II/2C     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1150462..1161403
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OSV60_RS05465 (OSV60_05465) basA 1150882..1152729 (+) 1848 WP_098713656.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -
  OSV60_RS05470 (OSV60_05470) basB 1152800..1154830 (-) 2031 WP_098713657.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  OSV60_RS05475 (OSV60_05475) - 1155331..1155462 (+) 132 WP_002044317.1 hypothetical protein -
  OSV60_RS05480 (OSV60_05480) ceuB 1155462..1156403 (+) 942 WP_001159458.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  OSV60_RS05485 (OSV60_05485) bauC 1156403..1157350 (+) 948 WP_098713658.1 ferric acinetobactin ABC transporter permease subunit BauC -
  OSV60_RS05490 (OSV60_05490) bauE 1157347..1158117 (+) 771 WP_000582117.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  OSV60_RS05495 (OSV60_05495) bauB 1158124..1159092 (+) 969 WP_098713659.1 siderophore-binding periplasmic lipoprotein BauB -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 33965.00 Da        Isoelectric Point: 8.4665

>NTDB_id=689167 OSV60_RS05480 WP_001159458.1 1155462..1156403(+) (ceuB) [Acinetobacter baumannii strain 86II/2C]
MQFGLFCIFIILCICSLLLGAEQIQWSTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLVCDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=689167 OSV60_RS05480 WP_001159458.1 1155462..1156403(+) (ceuB) [Acinetobacter baumannii strain 86II/2C]
ATGCAATTCGGCTTATTCTGTATTTTTATCATTTTATGTATTTGTTCGTTATTGCTCGGGGCTGAGCAAATACAGTGGTC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATTCCTCGTTTAATTACTATTGTGCTTA
CCGGTATCGGCTTGGCGGTATGTGGTGTCATCTTGCAGCATATTGTGCGTAACAAGTTTGTTGAACCGGAAACATCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCATTAACTTTAGTTCCGGTAACCAGCACGTTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATTCGCCGGATCCGTTTTAGAAATACGGTTTTAG
TTCCGGTTATTGGCTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGCCACTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTCGCACATCGCTTTACCGTGATTGGTATGGGTGAAGAGATGGCTTCTAGCTTGGGACTCA
GTTATGCAGCTATAGCCGCCATTGGTTTAATACTGGTTGCTATTACAGTTTCGACCACGGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTGGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCCATTGTGGC
TTTGGGTGGGGCGTCTCTATTACTAGTTTGCGACATTCTTGGTCGCTCAATCATTTATCCATTTGAAGTACCGATCGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.595

94.569

0.422