Detailed information NTG0689077

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: M5C55_RS18865
• Genome accession: NZ_CP097359
• Coordinates: 3825808..3826956 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain H208
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3820808..3831956

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M5C55_RS18845 (M5C55_18845)	-	3821211..3821894 (-)	684	WP_032872874.1	ABC transporter ATP-binding protein	-
M5C55_RS18850 (M5C55_18850)	-	3821909..3823339 (-)	1431	WP_032872876.1	ABC transporter permease	-
M5C55_RS18855 (M5C55_18855)	-	3823552..3824235 (+)	684	WP_032872879.1	response regulator transcription factor	-
M5C55_RS18860 (M5C55_18860)	-	3824222..3825655 (+)	1434	WP_161503657.1	HAMP domain-containing sensor histidine kinase	-
M5C55_RS18865 (M5C55_18865)	rapC	3825808..3826956 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
M5C55_RS18870 (M5C55_18870)	phrC	3826940..3827059 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
M5C55_RS18875 (M5C55_18875)	-	3827210..3827305 (-)	96	WP_021495118.1	YjcZ family sporulation protein	-
M5C55_RS18880 (M5C55_18880)	-	3827400..3828764 (-)	1365	WP_007609394.1	aspartate kinase	-
M5C55_RS18885 (M5C55_18885)	ceuB	3829178..3830131 (+)	954	WP_032872883.1	ABC transporter permease	Machinery gene
M5C55_RS18890 (M5C55_18890)	-	3830121..3831068 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
M5C55_RS18895 (M5C55_18895)	-	3831062..3831820 (+)	759	WP_007609404.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=689077 M5C55_RS18865 WP_007410270.1 3825808..3826956(+) (rapC) [Bacillus velezensis strain H208]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=689077 M5C55_RS18865 WP_007410270.1 3825808..3826956(+) (rapC) [Bacillus velezensis strain H208]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTACCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAGGGGCTTCTCGATTATTACGTCAATTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCATGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTGGAGCAGGACACATATAACGTCCGGATTATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568