Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   OSH17_RS05125 Genome accession   NZ_CP113073
Coordinates   1111126..1112067 (+) Length   313 a.a.
NCBI ID   WP_206677396.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain A118 DeltaH0N27_10820::kan H0N27_10830-K176N     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1106126..1117067
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OSH17_RS05110 (OSH17_05110) basA 1106546..1108393 (+) 1848 WP_168726512.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -
  OSH17_RS05115 (OSH17_05115) basB 1108464..1110494 (-) 2031 WP_168726630.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  OSH17_RS05120 (OSH17_05120) - 1110995..1111126 (+) 132 WP_001218004.1 hypothetical protein -
  OSH17_RS05125 (OSH17_05125) ceuB 1111126..1112067 (+) 942 WP_206677396.1 iron chelate uptake ABC transporter family permease subunit Machinery gene
  OSH17_RS05130 (OSH17_05130) bauC 1112067..1113014 (+) 948 WP_168726513.1 ferric acinetobactin ABC transporter permease subunit BauC -
  OSH17_RS05135 (OSH17_05135) bauE 1113011..1113781 (+) 771 WP_114154606.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  OSH17_RS05140 (OSH17_05140) bauB 1113788..1114756 (+) 969 WP_001104132.1 siderophore-binding periplasmic lipoprotein BauB -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 33925.98 Da        Isoelectric Point: 8.1466

>NTDB_id=689013 OSH17_RS05125 WP_206677396.1 1111126..1112067(+) (ceuB) [Acinetobacter baumannii strain A118 DeltaH0N27_10820::kan H0N27_10830-K176N]
MQFGLFCIFIILCICSLLLGAEQIQWSTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHCFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLICDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=689013 OSH17_RS05125 WP_206677396.1 1111126..1112067(+) (ceuB) [Acinetobacter baumannii strain A118 DeltaH0N27_10820::kan H0N27_10830-K176N]
ATGCAATTCGGCTTATTCTGTATTTTTATCATTTTATGTATTTGCTCGTTATTGCTCGGGGCTGAGCAAATACAGTGGTC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATTCCTCGTTTGATTACCATTGTACTCA
CCGGTATCGGGTTGGCGGTATGTGGCGTCATCTTGCAGCATATTGTGCGTAACAAGTTTGTTGAACCGGAAACTTCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCGTTAACTTTAGTTCCGGTAACCAGCACGCTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATCCGCCGGATCCGTTTTAGAAATACGGTTTTAG
TACCGGTAATTGGTTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGCCACTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTTGCACACTGCTTTACTGTGATTGGTATGGGGGAAGAGATGGCTTCTAGCTTAGGACTCA
GTTATGCGGCTATAGCCGCCATTGGTTTGATACTGGTTGCTATTACAGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTAGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCGATTGTGGC
TTTAGGTGGGGCGTCTCTATTACTGATTTGCGACATTCTTGGTCGTTCAATTATTTATCCATTTGAAGTGCCAATCGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.257

94.569

0.419