Detailed information NTG0689003

Bioinformatically predicted

Overview

• Name: cqsA
• Type: Regulator
• Locus tag: M5598_RS22685
• Genome accession: NZ_CP097356
• Coordinates: 1525008..1526189 (-)
• Length: 393 a.a.
• NCBI ID: WP_100088945.1
• Uniprot ID: -
• Organism: Vibrio parahaemolyticus strain 16-VB00198
• Function: induction of competence (predicted from homology) Competence regulation

Genomic Context

Location: 1520008..1531189

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M5598_RS22670 (M5598_22625)	-	1520410..1521543 (+)	1134	WP_031816849.1	multidrug effflux MFS transporter	-
M5598_RS22675 (M5598_22630)	-	1522269..1522562 (-)	294	Protein_1354	HAD family phosphatase	-
M5598_RS22680 (M5598_22635)	cqsS	1522882..1524930 (+)	2049	WP_031816847.1	response regulator	Regulator
M5598_RS22685 (M5598_22640)	cqsA	1525008..1526189 (-)	1182	WP_100088945.1	alpha-hydroxyketone-type quorum-sensing autoinducer synthase	Regulator
M5598_RS22690 (M5598_22645)	ylqF	1526544..1527488 (-)	945	WP_017448150.1	ribosome biogenesis GTPase YlqF	-
M5598_RS22695 (M5598_22650)	-	1528205..1528492 (-)	288	WP_050482081.1	DUF2787 family protein	-
M5598_RS22700 (M5598_22655)	-	1528489..1528860 (-)	372	Protein_1359	JAB domain-containing protein	-
M5598_RS22705 (M5598_22660)	-	1529094..1529273 (+)	180	WP_025625425.1	AlpA family transcriptional regulator	-
M5598_RS22710 (M5598_22665)	-	1529494..1529850 (+)	357	WP_050482080.1	DEAD/DEAH box helicase family protein	-
M5598_RS22715 (M5598_22670)	-	1530072..1530422 (+)	351	WP_228070901.1	hypothetical protein	-

Sequence

Protein

• Length: 393 a.a.
• Molecular weight: 43866.26 Da
• Isoelectric Point: 6.6125

>NTDB_id=689003 M5598_RS22685 WP_100088945.1 1525008..1526189(-) (cqsA) [Vibrio parahaemolyticus strain 16-VB00198]
MCTKNETKPLPSFIEERLNFHIQDLIKSNENQKHLVLGKRPSENAVVMQSNDYLSLSHNELIQKAHRDAISERDDNVVMS
AIFLQDDQSKPAFEHQLATFVGMESCLLSQSGWAANIGLLQTICVPNVPVYIDFFAHMSLWEGARTAGAQIHPFMHNNMN
HLRKQIQRHGAGIIVVDSVYSTIGTIAPLRAIYEMAKEFDCGLVVDESHSLGTHGPKGSGLLQELGLTQMVDFVTVSLAK
TFAYRAGAILGPNKLAQSLPFVAYPAIFSSTVLPQEVVRLEKTLEVIKAADDKRECLFKRAKELAIGLKRIGFKIRSESQ
IIALECGSERNTERVRDFLEERDVFGAVFCRPATGRNKNIIRFSVNADMTAQQVDHVLSACQEAFDHPDLEFV

Nucleotide

• Length: 1182 bp

>NTDB_id=689003 M5598_RS22685 WP_100088945.1 1525008..1526189(-) (cqsA) [Vibrio parahaemolyticus strain 16-VB00198]
ATGTGTACTAAAAACGAAACTAAACCACTGCCCTCTTTTATCGAGGAACGCCTTAATTTCCATATTCAAGATTTAATTAA
ATCTAACGAAAATCAAAAGCACCTCGTTCTTGGCAAACGACCGTCCGAAAATGCTGTGGTTATGCAAAGCAATGATTACC
TTTCGCTCTCTCACAATGAGCTCATTCAGAAAGCGCATCGAGACGCAATTTCTGAACGAGATGACAATGTCGTGATGTCA
GCAATCTTCTTGCAAGATGATCAATCAAAACCGGCCTTTGAGCACCAGCTGGCGACGTTTGTCGGTATGGAAAGTTGTTT
GTTGTCACAATCAGGATGGGCAGCCAATATTGGTTTACTGCAAACCATCTGCGTGCCAAACGTTCCCGTATACATCGACT
TTTTCGCTCATATGTCGTTGTGGGAAGGAGCACGCACCGCTGGAGCGCAGATTCATCCTTTCATGCACAACAACATGAAT
CATCTGCGCAAGCAGATCCAACGCCACGGTGCGGGCATCATCGTTGTCGATTCGGTGTATAGCACGATTGGCACAATCGC
CCCGTTACGTGCCATCTACGAAATGGCGAAGGAGTTCGATTGTGGCTTAGTGGTAGATGAATCTCATTCATTAGGCACAC
ACGGACCAAAGGGGTCTGGATTATTACAAGAACTGGGACTAACACAGATGGTGGATTTCGTTACCGTAAGTTTGGCGAAA
ACGTTTGCCTACCGCGCTGGTGCGATTTTAGGCCCGAACAAGCTAGCACAATCGCTGCCCTTCGTGGCCTATCCTGCGAT
TTTTAGCTCAACGGTTTTGCCGCAAGAAGTCGTGCGTCTAGAAAAAACACTTGAGGTAATTAAAGCGGCTGACGACAAAC
GTGAATGTTTGTTCAAGCGAGCCAAAGAACTCGCCATCGGATTAAAACGTATTGGGTTTAAAATTCGCAGCGAATCGCAG
ATTATTGCTCTTGAGTGTGGAAGTGAGAGAAACACTGAACGAGTACGCGATTTCCTTGAAGAAAGAGACGTTTTCGGTGC
GGTGTTTTGCCGACCGGCCACGGGCAGAAACAAGAACATCATTCGATTTTCTGTCAATGCCGACATGACAGCTCAACAAG
TGGATCACGTCTTATCGGCTTGTCAGGAGGCATTTGACCATCCCGACTTAGAATTTGTGTAA

Domains

Predicted by InterproScan.

• Aminotransferase class I and II (Aminotran_1_2) (45-379)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cqsA	Vibrio cholerae strain A1552	58.656	98.473	0.578