Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   OSH13_RS12450 Genome accession   NZ_CP113070
Coordinates   2640063..2641004 (-) Length   313 a.a.
NCBI ID   WP_206677396.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain A118 DeltaH0N27_10825::kan     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2635063..2646004
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OSH13_RS12435 (OSH13_12435) bauB 2637374..2638342 (-) 969 WP_001104132.1 siderophore-binding periplasmic lipoprotein BauB -
  OSH13_RS12440 (OSH13_12440) bauE 2638349..2639119 (-) 771 WP_114154606.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  OSH13_RS12445 (OSH13_12445) bauC 2639116..2640063 (-) 948 WP_168726513.1 ferric acinetobactin ABC transporter permease subunit BauC -
  OSH13_RS12450 (OSH13_12450) ceuB 2640063..2641004 (-) 942 WP_206677396.1 iron chelate uptake ABC transporter family permease subunit Machinery gene
  OSH13_RS12455 (OSH13_12455) - 2641004..2641135 (-) 132 WP_001218004.1 hypothetical protein -
  OSH13_RS12460 (OSH13_12460) basB 2641636..2643666 (+) 2031 WP_168726630.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  OSH13_RS12465 (OSH13_12465) basA 2643737..2645584 (-) 1848 WP_168726512.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 33925.98 Da        Isoelectric Point: 8.1466

>NTDB_id=688798 OSH13_RS12450 WP_206677396.1 2640063..2641004(-) (ceuB) [Acinetobacter baumannii strain A118 DeltaH0N27_10825::kan]
MQFGLFCIFIILCICSLLLGAEQIQWSTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHCFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLICDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=688798 OSH13_RS12450 WP_206677396.1 2640063..2641004(-) (ceuB) [Acinetobacter baumannii strain A118 DeltaH0N27_10825::kan]
ATGCAATTCGGCTTATTCTGTATTTTTATCATTTTATGTATTTGCTCGTTATTGCTCGGGGCTGAGCAAATACAGTGGTC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATTCCTCGTTTGATTACCATTGTACTCA
CCGGTATCGGGTTGGCGGTATGTGGCGTCATCTTGCAGCATATTGTGCGTAACAAGTTTGTTGAACCGGAAACTTCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCGTTAACTTTAGTTCCGGTAACCAGCACGCTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATCCGCCGGATCCGTTTTAGAAATACGGTTTTAG
TACCGGTAATTGGTTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGCCACTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTTGCACACTGCTTTACTGTGATTGGTATGGGGGAAGAGATGGCTTCTAGCTTAGGACTCA
GTTATGCGGCTATAGCCGCCATTGGTTTGATACTGGTTGCTATTACAGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTAGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCGATTGTGGC
TTTAGGTGGGGCGTCTCTATTACTGATTTGCGACATTCTTGGTCGTTCAATTATTTATCCATTTGAAGTGCCAATCGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.257

94.569

0.419