Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   OSV61_RS05165 Genome accession   NZ_CP113069
Coordinates   1116447..1117388 (+) Length   313 a.a.
NCBI ID   WP_065718407.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain 29D2     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1111447..1122388
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OSV61_RS05155 (OSV61_05155) basA 1111868..1113715 (+) 1848 WP_065718409.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -
  OSV61_RS05160 (OSV61_05160) basB 1113777..1115816 (-) 2040 WP_098714464.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  OSV61_RS05165 (OSV61_05165) ceuB 1116447..1117388 (+) 942 WP_065718407.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  OSV61_RS05170 (OSV61_05170) bauC 1117388..1118335 (+) 948 WP_065718406.1 ferric acinetobactin ABC transporter permease subunit BauC -
  OSV61_RS05175 (OSV61_05175) bauE 1118332..1119102 (+) 771 WP_000582115.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  OSV61_RS05180 (OSV61_05180) bauB 1119109..1120077 (+) 969 WP_065718405.1 siderophore-binding periplasmic lipoprotein BauB -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 33991.04 Da        Isoelectric Point: 8.4589

>NTDB_id=688701 OSV61_RS05165 WP_065718407.1 1116447..1117388(+) (ceuB) [Acinetobacter baumannii strain 29D2]
MQFGLFCIFIILCICSLLLGAEQIQWSTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIGIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAYRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLICDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=688701 OSV61_RS05165 WP_065718407.1 1116447..1117388(+) (ceuB) [Acinetobacter baumannii strain 29D2]
ATGCAATTCGGCTTATTCTGTATTTTTATCATTTTATGTATTTGCTCATTATTGCTCGGGGCTGAGCAAATCCAGTGGTC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATCCCTCGTTTAATTACTATTGTGCTCA
CCGGTATCGGGTTGGCGGTATGTGGCGTCATCTTGCAGCATATTGTGCGTAACAAGTTTGTTGAACCGGAAACTTCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCGTTAACTTTAGTTCCGGTAACCAGCACGCTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGGAATTATTCGGCGGATCCGTTTTAGAAATACGGTTTTAG
TACCTGTTATTGGCTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCATATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGTCATTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTTGCATACCGCTTTACCGTGATTGGTATGGGTGAAGAGATGGCTTCTAGCCTAGGACTTA
GTTATGCAGCTATAGCCGCTATTGGTTTGATACTGGTTGCCATTACAGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTAGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCGATTGTGGC
TTTAGGTGGGGCGTCTCTATTACTGATTTGCGACATTCTTGGCCGCTCAATTATTTACCCATTTGAAGTGCCAATCGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

43.919

94.569

0.415