Detailed information NTG0688615

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: M5D45_RS01590
• Genome accession: NZ_CP097330
• Coordinates: 348013..349344 (-)
• Length: 443 a.a.
• NCBI ID: WP_414734243.1
• Uniprot ID: -
• Organism: Cupriavidus campinensis strain G5
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 343013..354344

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M5D45_RS01575 (M5D45_01575)	-	344004..344705 (+)	702	WP_149136789.1	fumarylacetoacetate hydrolase family protein	-
M5D45_RS01580 (M5D45_01580)	maiA	344713..345357 (+)	645	WP_187645187.1	maleylacetoacetate isomerase	-
M5D45_RS01585 (M5D45_01585)	-	345443..347779 (-)	2337	WP_250025024.1	carboxypeptidase-like regulatory domain-containing protein	-
M5D45_RS01590 (M5D45_01590)	pilA	348013..349344 (-)	1332	WP_414734243.1	signal recognition particle-docking protein FtsY	Machinery gene
M5D45_RS01595 (M5D45_01595)	-	349404..350954 (+)	1551	WP_250025025.1	M16 family metallopeptidase	-
M5D45_RS01600 (M5D45_01600)	-	350964..352331 (+)	1368	WP_144198921.1	M16 family metallopeptidase	-
M5D45_RS01605 (M5D45_01605)	rsmD	352449..353093 (+)	645	WP_186296875.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
M5D45_RS01610 (M5D45_01610)	coaD	353286..353771 (+)	486	WP_011515175.1	pantetheine-phosphate adenylyltransferase	-
M5D45_RS01615 (M5D45_01615)	-	353837..354097 (+)	261	WP_144198919.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 443 a.a.
• Molecular weight: 46583.28 Da
• Isoelectric Point: 6.1767

>NTDB_id=688615 M5D45_RS01590 WP_414734243.1 348013..349344(-) (pilA) [Cupriavidus campinensis strain G5]
MFSFWKKRKAEPAPAPAEPPAAEPAPAITPAPVASPTAVPQPQPSPSPAPAPLPVPAPTPAPTPAPAPVPVLVPVPVPVP
VPVPVPVPAPTPAPAPAPAPAPVPVPVPVPVPAQVPPPPPAPVAYDPPVVEELELTPPPAQTAEAKRGWMTRLRAGLSKT
SRNLGTLFVGVKVDEALFEELETALLMADAGVEATEFLLGELRRRVKNERLETAEAVKTALRELLTDLLRPLEKTMELGR
EQPLVMMIAGVNGAGKTTSIGKLCKHFQAYHQSVLLAAGDTFRAAAREQLTIWGERNNVTVVAQEGGDPAAVIFDAVNAA
RARKIDIVMADTAGRLPTQLHLMEELKKVKRVIGKSMPTAPHEVLLVIDANTGQNALSQTRAFDDALGLTGLIVTKLDGT
AKGGILAAIARQRPVPVYFIGVGEKVEDLQPFKADEFAEALLG

Nucleotide

• Length: 1332 bp

>NTDB_id=688615 M5D45_RS01590 WP_414734243.1 348013..349344(-) (pilA) [Cupriavidus campinensis strain G5]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCCGAGCCGGCCCCTGCGCCCGCCGAGCCGCCGGCTGCCGAGCCGGCGCCGGC
CATCACGCCGGCACCGGTGGCCTCGCCCACCGCTGTCCCCCAACCCCAGCCGTCGCCCAGCCCGGCGCCGGCGCCCTTGC
CTGTTCCTGCTCCAACCCCTGCTCCAACCCCTGCGCCTGCCCCGGTTCCGGTCCTCGTGCCGGTGCCGGTTCCGGTGCCA
GTCCCTGTTCCCGTCCCGGTTCCAGCCCCCACGCCGGCTCCGGCTCCCGCACCGGCGCCTGCTCCGGTGCCCGTACCCGT
GCCGGTCCCGGTTCCCGCCCAAGTGCCGCCTCCGCCGCCGGCGCCGGTCGCCTATGACCCGCCGGTTGTCGAGGAACTCG
AACTGACGCCGCCGCCAGCCCAGACCGCCGAGGCCAAGCGCGGCTGGATGACGCGCCTGCGTGCCGGGTTGTCGAAGACG
AGCCGGAACCTCGGCACGCTGTTCGTCGGCGTCAAGGTGGACGAGGCCCTGTTCGAGGAACTCGAAACCGCGCTGCTGAT
GGCCGACGCTGGTGTCGAAGCCACCGAATTCCTGCTCGGCGAACTCCGCCGCCGCGTGAAGAACGAGCGCCTCGAGACCG
CCGAAGCCGTGAAGACCGCCCTGCGCGAGTTGCTGACCGACCTGCTGCGCCCGCTCGAGAAGACCATGGAACTGGGCCGC
GAGCAGCCGCTGGTGATGATGATCGCGGGCGTGAACGGCGCCGGCAAGACCACCAGCATCGGCAAGCTCTGCAAGCACTT
CCAGGCCTACCACCAGTCGGTGCTGCTGGCGGCCGGCGACACCTTCCGCGCCGCCGCACGCGAGCAACTGACCATCTGGG
GCGAGCGCAACAACGTCACCGTGGTTGCCCAGGAAGGCGGCGACCCGGCGGCGGTGATCTTCGATGCCGTGAACGCGGCG
CGCGCGCGCAAGATCGACATCGTGATGGCGGACACCGCTGGGCGCCTGCCCACGCAGTTGCATCTGATGGAAGAACTGAA
GAAGGTGAAGCGCGTGATCGGCAAGTCAATGCCGACGGCCCCGCACGAGGTGCTGCTGGTGATCGACGCCAACACCGGGC
AGAACGCCCTGTCCCAGACCCGCGCCTTCGACGACGCGCTGGGCCTGACCGGCCTGATCGTGACCAAGCTGGACGGCACG
GCCAAGGGCGGCATCCTCGCCGCCATCGCCCGGCAGCGCCCGGTGCCGGTGTACTTCATCGGCGTGGGCGAGAAAGTGGA
AGATCTTCAGCCATTCAAGGCGGACGAATTCGCTGAAGCACTACTCGGGTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (167-223)

• SRP54-type protein, GTPase domain (SRP54) (244-443)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.998	100	0.497