Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   OS088_RS07985 Genome accession   NZ_CP113051
Coordinates   1571282..1572100 (-) Length   272 a.a.
NCBI ID   WP_001124422.1    Uniprot ID   P66002
Organism   Staphylococcus aureus strain Viktor     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1566282..1577100
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OS088_RS07965 - 1567375..1568352 (+) 978 WP_267814040.1 metal-dependent hydrolase -
  OS088_RS07970 - 1568613..1569449 (-) 837 WP_154284030.1 hypothetical protein -
  OS088_RS07975 - 1569458..1570975 (-) 1518 WP_053876268.1 ABC transporter ATP-binding protein -
  OS088_RS07980 - 1570990..1571304 (-) 315 WP_000435806.1 YfhH family protein -
  OS088_RS07985 recX 1571282..1572100 (-) 819 WP_001124422.1 recombination regulator RecX Regulator
  OS088_RS07990 sgtB 1572361..1573170 (-) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  OS088_RS07995 - 1573511..1574026 (-) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  OS088_RS08000 - 1574157..1574318 (-) 162 WP_001005407.1 SE1561 family protein -
  OS088_RS08005 yfkAB 1574542..1575693 (+) 1152 WP_209205691.1 radical SAM/CxCxxxxC motif protein YfkAB -
  OS088_RS08010 - 1575953..1576483 (-) 531 WP_000184383.1 acyl-CoA thioesterase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32259.10 Da        Isoelectric Point: 5.9211

>NTDB_id=688562 OS088_RS07985 WP_001124422.1 1571282..1572100(-) (recX) [Staphylococcus aureus strain Viktor]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=688562 OS088_RS07985 WP_001124422.1 1571282..1572100(-) (recX) [Staphylococcus aureus strain Viktor]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCGCAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P66002

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.632

100

0.996