Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OS088_RS05025 Genome accession   NZ_CP113051
Coordinates   966509..967132 (-) Length   207 a.a.
NCBI ID   WP_001208760.1    Uniprot ID   Q93SM0
Organism   Staphylococcus aureus strain Viktor     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 961509..972132
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OS088_RS05000 rpmG 963086..963235 (+) 150 WP_001265708.1 50S ribosomal protein L33 -
  OS088_RS05005 rpsN 963689..963958 (+) 270 WP_001085655.1 30S ribosomal protein S14 -
  OS088_RS05010 guaC 964115..965092 (+) 978 WP_209205990.1 GMP reductase -
  OS088_RS05020 - 965114..966130 (+) 1017 WP_170957313.1 CAP domain-containing protein -
  OS088_RS05025 dinR/lexA 966509..967132 (-) 624 WP_001208760.1 transcriptional repressor LexA Regulator
  OS088_RS05030 sosA 967275..967508 (+) 234 WP_154284544.1 DNA damage-induced cell division inhibitor SosA -
  OS088_RS05035 - 967644..967883 (+) 240 WP_000071351.1 DUF896 domain-containing protein -
  OS088_RS05040 recP/tkt 968004..969992 (+) 1989 WP_154284543.1 transketolase Machinery gene
  OS088_RS05045 - 970270..970512 (+) 243 WP_000246909.1 YneF family protein -
  OS088_RS05050 - 970499..970597 (+) 99 WP_001789897.1 hypothetical protein -
  OS088_RS05055 - 970691..971158 (+) 468 WP_000966142.1 CcdC family protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23301.46 Da        Isoelectric Point: 4.8811

>NTDB_id=688532 OS088_RS05025 WP_001208760.1 966509..967132(-) (dinR/lexA) [Staphylococcus aureus strain Viktor]
MRELTKRQSEIYNYIKQVVQTKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=688532 OS088_RS05025 WP_001208760.1 966509..967132(-) (dinR/lexA) [Staphylococcus aureus strain Viktor]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAATTATATTAAACAAGTTGTTCAAACGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCAACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAGTATTT
TCCATTACCTGAACACTTAACATCGACACATAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTCGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q93SM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657