Detailed information NTG0688500

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: M5J22_RS17845
• Genome accession: NZ_CP097326
• Coordinates: 3635146..3636291 (+)
• Length: 381 a.a.
• NCBI ID: WP_017418708.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain GUCC45
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3630146..3641291

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M5J22_RS17825 (M5J22_17825)	-	3630620..3631336 (-)	717	WP_014306017.1	Crp/Fnr family transcriptional regulator	-
M5J22_RS17830 (M5J22_17830)	narK	3631434..3632624 (-)	1191	WP_201489104.1	nitrate transporter NarK	-
M5J22_RS17835 (M5J22_17835)	argS	3632759..3634429 (-)	1671	WP_003151071.1	arginine--tRNA ligase	-
M5J22_RS17840 (M5J22_17840)	-	3634426..3634854 (-)	429	WP_003151069.1	DUF1934 family protein	-
M5J22_RS17845 (M5J22_17845)	rapF	3635146..3636291 (+)	1146	WP_017418708.1	tetratricopeptide repeat protein	Regulator
M5J22_RS17850 (M5J22_17850)	-	3636275..3636394 (+)	120	WP_131242041.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
M5J22_RS17855 (M5J22_17855)	speB	3636517..3637389 (-)	873	WP_003151054.1	agmatinase	-
M5J22_RS17860 (M5J22_17860)	speE	3637449..3638279 (-)	831	WP_003151052.1	spermidine synthase	-
M5J22_RS17865 (M5J22_17865)	-	3638479..3640551 (+)	2073	WP_057080299.1	transglycosylase domain-containing protein	-
M5J22_RS17870 (M5J22_17870)	-	3640575..3641006 (-)	432	WP_043867516.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45782.29 Da
• Isoelectric Point: 5.0722

>NTDB_id=688500 M5J22_RS17845 WP_017418708.1 3635146..3636291(+) (rapF) [Bacillus velezensis strain GUCC45]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEEDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDEKKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLENIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLESKLMYADIEELALDVAKYYYTKEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=688500 M5J22_RS17845 WP_017418708.1 3635146..3636291(+) (rapF) [Bacillus velezensis strain GUCC45]
GTGGCGAGTGTTTTATCGTCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAGCTTGCAGGCCTGGAAGAAGATCAGGATCTTCATCTGTACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGGCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTACGCGCGGCAGGCTTATTTAATTTATAAAGATGAAAAAAAATACAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGAACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGCCATTCACTTCCGCAGCCCTACTTCTT
ACTTACGCAGATTTATTTTAAGTTAGAAAATATAGATAATGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTGGAATATTTATATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAGTAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACAAAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAAGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.341	100	0.703
rapC	Bacillus subtilis subsp. subtilis str. 168	53.421	99.738	0.533