Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   M5J22_RS07195 Genome accession   NZ_CP097326
Coordinates   1395140..1395604 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain GUCC45     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1390140..1400604
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M5J22_RS07175 (M5J22_07175) - 1390621..1392440 (+) 1820 Protein_1355 PAS domain-containing protein -
  M5J22_RS07180 (M5J22_07180) - 1392466..1393635 (-) 1170 WP_044053155.1 aminotransferase A -
  M5J22_RS07185 (M5J22_07185) - 1393836..1393997 (-) 162 WP_007409608.1 hypothetical protein -
  M5J22_RS07190 (M5J22_07190) cheV 1394186..1395097 (+) 912 WP_014304917.1 chemotaxis protein CheV -
  M5J22_RS07195 (M5J22_07195) kre 1395140..1395604 (-) 465 WP_003154622.1 YkyB family protein Regulator
  M5J22_RS07200 (M5J22_07200) - 1395727..1397019 (-) 1293 WP_201488889.1 MFS transporter -
  M5J22_RS07205 (M5J22_07205) - 1397095..1397589 (-) 495 WP_201489156.1 L,D-transpeptidase family protein -
  M5J22_RS07210 (M5J22_07210) - 1397664..1398527 (-) 864 WP_015388306.1 metallophosphoesterase -
  M5J22_RS07215 (M5J22_07215) fadH 1398671..1399435 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  M5J22_RS07220 (M5J22_07220) - 1399546..1400089 (+) 544 Protein_1364 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=688458 M5J22_RS07195 WP_003154622.1 1395140..1395604(-) (kre) [Bacillus velezensis strain GUCC45]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=688458 M5J22_RS07195 WP_003154622.1 1395140..1395604(-) (kre) [Bacillus velezensis strain GUCC45]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929