Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   OS087_RS08860 Genome accession   NZ_CP113047
Coordinates   1754348..1755022 (+) Length   224 a.a.
NCBI ID   WP_001166500.1    Uniprot ID   Q99VW2
Organism   Staphylococcus aureus strain Sett     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1749348..1760022
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OS087_RS08835 - 1749527..1750594 (+) 1068 WP_267830335.1 hypothetical protein -
  OS087_RS08840 - 1750745..1751788 (+) 1044 WP_267830337.1 alpha/beta hydrolase -
  OS087_RS08845 - 1752153..1752581 (+) 429 WP_000198504.1 hypothetical protein -
  OS087_RS08850 - 1752790..1753296 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  OS087_RS08855 graX 1753409..1754332 (+) 924 WP_000802955.1 auxiliary protein GraX/ApsX -
  OS087_RS08860 braR 1754348..1755022 (+) 675 WP_001166500.1 response regulator transcription factor GraR/ApsR Regulator
  OS087_RS08865 graS 1755015..1756055 (+) 1041 WP_267830340.1 histidine kinase GraS/ApsS -
  OS087_RS08870 vraF 1756199..1756960 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  OS087_RS08875 vraG 1756950..1758839 (+) 1890 WP_000143627.1 ABC transporter permease VraG -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26065.87 Da        Isoelectric Point: 4.3563

>NTDB_id=688349 OS087_RS08860 WP_001166500.1 1754348..1755022(+) (braR) [Staphylococcus aureus strain Sett]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=688349 OS087_RS08860 WP_001166500.1 1754348..1755022(+) (braR) [Staphylococcus aureus strain Sett]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCGTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTCGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATAAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(149-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q99VW2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397