Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   OS087_RS05570 Genome accession   NZ_CP113047
Coordinates   1075587..1076387 (+) Length   266 a.a.
NCBI ID   WP_267830568.1    Uniprot ID   -
Organism   Staphylococcus aureus strain Sett     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1070587..1081387
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OS087_RS05555 walK 1071256..1073082 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  OS087_RS05560 yycH 1073075..1074409 (+) 1335 WP_001060141.1 two-component system activity regulator YycH -
  OS087_RS05565 - 1074410..1075198 (+) 789 WP_267830567.1 two-component system regulatory protein YycI -
  OS087_RS05570 vicX 1075587..1076387 (+) 801 WP_267830568.1 MBL fold metallo-hydrolase Regulator
  OS087_RS05575 adsA 1076614..1078932 (+) 2319 WP_000645745.1 LPXTG-anchored adenosine synthase AdsA -
  OS087_RS05580 rlmH 1079300..1079779 (+) 480 WP_267830569.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  OS087_RS05585 - 1080102..1081379 (+) 1278 Protein_1063 MrcB family domain-containing protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30332.56 Da        Isoelectric Point: 6.4120

>NTDB_id=688340 OS087_RS05570 WP_267830568.1 1075587..1076387(+) (vicX) [Staphylococcus aureus strain Sett]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDRIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=688340 OS087_RS05570 WP_267830568.1 1075587..1076387(+) (vicX) [Staphylococcus aureus strain Sett]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCGTATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCAATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACCTATCGCATTTATCACAAGATAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

48.638

96.617

0.47