Detailed information NTG0688324

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: M4S28_RS14500
• Genome accession: NZ_CP097293
• Coordinates: 3245389..3248778 (+)
• Length: 1129 a.a.
• NCBI ID: WP_249632014.1
• Uniprot ID: -
• Organism: Vibrio sp. J383
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 3240389..3253778

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M4S28_RS14480 (M4S28_14480)	erpA	3240677..3241018 (-)	342	WP_249632012.1	iron-sulfur cluster insertion protein ErpA	-
M4S28_RS14485 (M4S28_14485)	hemL	3241315..3242610 (+)	1296	WP_017084255.1	glutamate-1-semialdehyde 2,1-aminomutase	-
M4S28_RS14490 (M4S28_14490)	-	3242954..3244039 (+)	1086	WP_004734536.1	AI-2E family transporter	-
M4S28_RS14495 (M4S28_14495)	rsmC	3244150..3245172 (+)	1023	WP_249632013.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
M4S28_RS14500 (M4S28_14500)	chiS	3245389..3248778 (+)	3390	WP_249632014.1	response regulator	Regulator
M4S28_RS14505 (M4S28_14505)	-	3249489..3251171 (+)	1683	WP_004734533.1	ABC transporter substrate-binding protein	-
M4S28_RS14510 (M4S28_14510)	-	3251341..3252327 (+)	987	WP_004734532.1	ABC transporter permease	-
M4S28_RS14515 (M4S28_14515)	-	3252330..3253355 (+)	1026	WP_004734531.1	ABC transporter permease	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127177.82 Da
• Isoelectric Point: 5.4266

>NTDB_id=688324 M4S28_RS14500 WP_249632014.1 3245389..3248778(+) (chiS) [Vibrio sp. J383]
MFRFYRKQKFKRLQNTLMLAFLVLSITPVTLIAIFFLQSHSQDLQEQSTSHLVSVRDTKQQQIVDYLQAQESQVMGFVRS
ELANASGGRFYGLINAFQRLGLDIDEARSNAQQRYIQGSGDQIKTSILPESSSFIGSERYRLLHKRYHNSYQELLKRSDF
DDILLVDINGNVAYSIFKRDDYGTNLLTGKYKDSNLGVTFQRLAKDVKDKRKSNEDYTPVIVSDFKDENGKQTAWLGAPI
VQQGYLHSYAMFRLPINGITKLIADLNKSSNIQTLLVGDDHLPRSLAHSQESINLSLDVVDKALAGETAVGTFNNTQDQA
IIAAYTPIELKYATWALVVELPEKEAFARIHQLEKIFVIVMLTAIILVFVASHYLSNFITSPLLKLTWAAEKVSAGDLDE
TMINTERKDEIGRLAVSFERMQRSIREKMQLIKSQNGELEDNLKTIQKQNEELQLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPIPANQKYQLDIIINSGQRLATLVDDLLDYHKMRYGSLDIKKSAVDLSAATSLVLELSHHLLGNKPIRI
INQVPSDLGLVSSDPQRLEQVMYNLVGNAIKYTSEGKIVISASVIDDNIRVQVVDTGQGIPAEYLEHIFEPLIQAGQDAS
NYRQGAGLGLSISRQLIELMGGSLYVSSQPMLGTTFSFTLPLATQEELDSYSESGSYSHFQAPDLIDNTQQENSAISENP
DGPLLVIADDEPVNLRVLDSFLKLEGYRVRTACDGPETIELIEKEKPELLLLDIMMPGMSGYQVCEALRKQYDHAQLPII
MLTALNQAEDRVRGFEAGANDYLSKPFNKQELAARITAHLSASKAEQRRIENDQLQLELKHRAMVEANLLETQGRLLEQL
ESAPEAIICIRDDQRIRFANEAAAKLFRRGQEQLKRSMADEIIAPKYLKVEQAHYCGDIDIYIDDTRQRIPSDILKLPEG
SGLDTMYIFNVGGGVNSNRVNNLETAVEALSSYAFEGDKDKLQQLKELGGEFTRLADKATGEGKNKQELMREVLVDVMTN
AIIYWESVTGETKFAFAEKSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLSSIEFILEHCKEQTPERTHIEMLR
DKLQKLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=688324 M4S28_RS14500 WP_249632014.1 3245389..3248778(+) (chiS) [Vibrio sp. J383]
ATGTTTAGATTCTATCGTAAGCAGAAGTTTAAGCGCCTTCAAAATACCCTAATGTTGGCATTTCTTGTCCTCAGTATTAC
CCCAGTGACACTTATCGCGATATTTTTCCTCCAGTCGCACAGTCAGGATCTTCAGGAACAAAGTACTTCGCACCTTGTTT
CGGTCCGTGATACTAAGCAACAGCAAATTGTCGATTACCTACAAGCTCAAGAGTCCCAAGTCATGGGCTTTGTTCGCTCA
GAACTTGCCAATGCCAGTGGCGGGCGATTCTATGGTTTAATCAATGCGTTCCAACGCTTAGGATTAGATATTGACGAAGC
GCGCAGTAATGCGCAGCAGCGTTACATTCAAGGCTCTGGCGATCAAATCAAGACATCAATTCTTCCAGAATCTAGTAGCT
TTATTGGCAGCGAACGTTATCGACTGCTTCACAAGCGCTACCATAACTCATATCAAGAATTGCTTAAGCGTTCAGACTTT
GATGACATTCTATTAGTCGACATTAACGGTAACGTCGCTTACTCAATCTTTAAGCGTGATGATTACGGTACTAACTTGCT
AACAGGTAAGTACAAAGATTCAAACCTAGGCGTTACCTTTCAACGCTTAGCAAAAGACGTAAAAGACAAACGTAAATCCA
ACGAGGACTATACACCGGTTATCGTTTCTGACTTTAAAGATGAGAACGGTAAGCAGACGGCTTGGTTAGGTGCGCCTATT
GTTCAACAAGGCTACCTGCACAGTTACGCCATGTTTAGGCTGCCAATCAATGGGATTACTAAGCTGATCGCGGATCTCAA
CAAGAGTTCAAATATTCAAACACTGCTTGTGGGTGATGATCACCTGCCACGCAGCCTCGCCCATTCGCAAGAGTCGATTA
ATTTAAGCTTAGACGTTGTCGATAAAGCATTGGCTGGCGAAACGGCCGTAGGTACGTTCAACAACACTCAAGATCAAGCG
ATCATCGCAGCATATACCCCAATTGAGCTGAAATACGCAACATGGGCTCTTGTCGTAGAGCTGCCAGAAAAAGAGGCGTT
TGCCCGTATTCATCAGTTAGAGAAGATCTTCGTGATCGTGATGCTCACAGCGATCATTCTTGTGTTTGTCGCATCGCATT
ATCTGTCCAATTTCATCACTTCCCCTCTCCTCAAACTGACGTGGGCTGCCGAGAAAGTCTCTGCTGGTGATCTTGATGAA
ACCATGATCAATACCGAACGCAAAGATGAAATAGGCCGACTGGCGGTTAGCTTCGAAAGAATGCAGCGATCGATCCGTGA
AAAAATGCAGCTCATCAAGAGCCAAAACGGTGAGCTTGAGGACAACCTTAAGACCATTCAAAAGCAAAATGAAGAGTTGC
AACTGGCGAACAAACTTAAAGATGAATTCTTAGCCACCACCTCACATGAATTGAGAACGCCATTGCATGGCATGGTTGGT
ATCGCTGAAGCGCTAATATCTGGTGCTAACGGCCCTATTCCTGCCAACCAGAAGTACCAATTGGATATCATCATCAATAG
TGGTCAGAGGTTGGCTACACTGGTTGATGACCTGCTTGATTATCACAAGATGCGCTATGGCAGCTTGGATATTAAGAAGT
CTGCTGTTGATTTATCTGCAGCCACCAGCTTAGTGCTTGAGTTATCTCATCACCTGTTAGGTAACAAGCCAATCCGCATC
ATTAACCAAGTGCCAAGCGATTTAGGTCTCGTTTCATCGGATCCTCAACGACTTGAGCAAGTGATGTATAACTTGGTTGG
CAATGCCATCAAGTACACATCAGAAGGTAAGATTGTTATCTCAGCAAGCGTCATCGACGACAACATTCGAGTACAAGTTG
TTGATACCGGTCAAGGTATACCTGCTGAATATCTTGAACACATCTTTGAGCCATTGATTCAAGCTGGCCAAGACGCAAGT
AACTATCGCCAAGGTGCCGGCCTTGGGTTATCCATCAGTCGTCAGTTAATCGAGTTGATGGGTGGTTCGCTGTATGTAAG
TAGCCAGCCGATGCTTGGCACTACATTCAGCTTCACATTACCTTTAGCTACCCAAGAAGAACTGGATAGCTACAGTGAGT
CAGGGAGCTACTCACACTTCCAAGCGCCGGATTTAATTGATAACACTCAGCAAGAAAACAGCGCTATCAGTGAAAACCCA
GATGGCCCGTTATTGGTTATCGCCGATGATGAGCCGGTGAACCTGCGCGTATTAGACAGCTTCTTGAAGCTAGAAGGTTA
TCGAGTTCGCACCGCCTGTGACGGCCCTGAGACCATTGAACTGATTGAAAAAGAGAAACCAGAGTTACTTCTGCTCGACA
TCATGATGCCAGGTATGAGCGGCTATCAGGTTTGTGAAGCACTGCGTAAGCAATACGATCATGCACAATTGCCAATCATC
ATGCTAACGGCACTCAACCAAGCGGAAGACCGGGTTCGCGGTTTCGAAGCGGGTGCCAATGACTATTTATCCAAGCCTTT
CAACAAACAAGAACTGGCGGCTCGAATTACTGCGCACCTATCAGCAAGCAAAGCTGAGCAAAGACGTATTGAGAATGATC
AATTGCAACTAGAGCTTAAACACAGGGCCATGGTTGAAGCTAACCTGCTAGAAACTCAAGGGCGCTTGCTAGAGCAGCTA
GAATCAGCCCCTGAGGCCATCATCTGTATTCGTGATGACCAACGTATTCGCTTCGCCAACGAAGCGGCTGCTAAGCTGTT
TAGACGTGGGCAAGAACAACTCAAGCGTTCAATGGCCGACGAGATCATCGCGCCTAAATACCTGAAGGTGGAACAAGCTC
ACTACTGTGGTGATATTGATATCTATATAGACGACACACGTCAGCGCATTCCAAGTGATATCCTTAAGCTACCTGAAGGC
TCAGGGCTCGACACCATGTATATCTTCAATGTCGGTGGTGGCGTTAACTCAAACCGAGTCAATAACCTCGAAACAGCGGT
TGAGGCACTTTCAAGCTACGCCTTTGAAGGTGACAAAGATAAGCTTCAACAACTGAAGGAGCTTGGCGGTGAATTTACTC
GCCTTGCTGATAAGGCAACTGGTGAGGGTAAAAACAAGCAAGAGCTGATGCGTGAAGTACTAGTCGATGTCATGACCAAT
GCCATTATCTACTGGGAGTCTGTTACTGGGGAGACCAAGTTTGCTTTCGCAGAAAAGAGTGGCTTATGGCGAGTCTACTT
AGACCGCAGTACCCTACAAACTAGAACGCTAGACAAATACCTACGAGTAGAAACTCTACCGAAAACACCTCGCTGGCGAA
CGGTACTGAGCTCTATCGAATTCATACTTGAGCACTGTAAAGAACAAACACCAGAAAGAACTCATATCGAGATGCTAAGG
GATAAACTACAGAAACTACTGACCAGCTAA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• PAS domain (PAS_8) (880-914)

• HAMP domain (HAMP) (375-427)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• Response regulator receiver domain (Response_reg) (726-836)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.439	100	0.764