Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   OS087_RS00795 Genome accession   NZ_CP113047
Coordinates   164273..165013 (-) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain Sett     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 159273..170013
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OS087_RS00770 hemH 160149..161072 (-) 924 WP_000162881.1 ferrochelatase -
  OS087_RS00775 hemE 161130..162167 (-) 1038 WP_262634126.1 uroporphyrinogen decarboxylase -
  OS087_RS00780 - 162157..162267 (-) 111 WP_031866187.1 hypothetical protein -
  OS087_RS00785 traP 162430..162933 (+) 504 WP_000737978.1 signal transduction protein TRAP -
  OS087_RS00790 ecsB 163057..164280 (-) 1224 WP_049311633.1 ABC transporter permease EcsB -
  OS087_RS00795 pptA 164273..165013 (-) 741 WP_000216874.1 ABC transporter ATP-binding protein EcsA Regulator
  OS087_RS00800 - 165147..165569 (+) 423 WP_000004981.1 HIT family protein -
  OS087_RS00805 - 165711..166076 (+) 366 WP_000648118.1 YtxH domain-containing protein -
  OS087_RS00810 - 166809..167366 (+) 558 WP_000477962.1 DUF3267 domain-containing protein -
  OS087_RS00815 - 167571..168533 (+) 963 WP_000782121.1 foldase protein PrsA -
  OS087_RS00820 yhaM 168654..169595 (-) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=688317 OS087_RS00795 WP_000216874.1 164273..165013(-) (pptA) [Staphylococcus aureus strain Sett]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=688317 OS087_RS00795 WP_000216874.1 164273..165013(-) (pptA) [Staphylococcus aureus strain Sett]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATCGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACATATAGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAAACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTACTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545