Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   M3Y14_RS20045 Genome accession   NZ_CP097257
Coordinates   3815309..3815767 (+) Length   152 a.a.
NCBI ID   WP_000804854.1    Uniprot ID   A0A2B8TGS8
Organism   Bacillus thuringiensis strain Bt Gxmzu777-1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3810309..3820767
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M3Y14_RS20030 (M3Y14_19960) - 3810826..3811062 (+) 237 WP_219919849.1 hypothetical protein -
  M3Y14_RS20035 (M3Y14_19965) - 3811376..3813484 (-) 2109 WP_264539082.1 polyphosphate kinase -
  M3Y14_RS20040 (M3Y14_19970) - 3813593..3815167 (-) 1575 WP_264539083.1 Ppx/GppA family phosphatase -
  M3Y14_RS20045 (M3Y14_19975) kre 3815309..3815767 (+) 459 WP_000804854.1 YkyB family protein Regulator
  M3Y14_RS20050 (M3Y14_19980) - 3815799..3816461 (-) 663 WP_219919853.1 YkyA family protein -
  M3Y14_RS20055 (M3Y14_19985) - 3817114..3817755 (-) 642 WP_264539084.1 diguanylate cyclase domain-containing protein -
  M3Y14_RS20060 (M3Y14_19990) - 3817919..3818152 (+) 234 WP_000939452.1 SPP1 phage holin family protein -
  M3Y14_RS20065 (M3Y14_19995) - 3818185..3818685 (-) 501 WP_219919859.1 hypothetical protein -
  M3Y14_RS20070 (M3Y14_20000) - 3819112..3820653 (+) 1542 WP_219919861.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17784.47 Da        Isoelectric Point: 10.6793

>NTDB_id=688164 M3Y14_RS20045 WP_000804854.1 3815309..3815767(+) (kre) [Bacillus thuringiensis strain Bt Gxmzu777-1]
MKPSQPQSQLHNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLITEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKDDFRTLPHLGHLESSYRNPKTTLSLTIAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=688164 M3Y14_RS20045 WP_000804854.1 3815309..3815767(+) (kre) [Bacillus thuringiensis strain Bt Gxmzu777-1]
ATGAAACCTTCACAACCACAATCTCAATTACATAATCAACATTCTATTAATAGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAATCCTAAGTACTTATATTGGTTAAAAAAGACTGCTTTAGAACGCTTAATTACTGAAA
AAAAGGCTATCAAAGAAGGATTACATTTTTCTAGAAATCCACGTTTTAGTCAACAACAATCCGATGTTCTTATACGTTTA
GGTGATTATTTTTTCCATATCCCTCCTACGAAAGATGATTTTCGCACCCTACCACATCTTGGTCACCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAATAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCATTAAAAC
AAGAAAAAAAATTAAGCGAACCAGTTCCATGGTATAGCCGTACCTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2B8TGS8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

63.793

76.316

0.487