Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   M3Y14_RS05860 Genome accession   NZ_CP097257
Coordinates   1139094..1140920 (+) Length   608 a.a.
NCBI ID   WP_105584252.1    Uniprot ID   -
Organism   Bacillus thuringiensis strain Bt Gxmzu777-1     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1134094..1145920
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M3Y14_RS05840 (M3Y14_05815) - 1134306..1134980 (-) 675 WP_219917482.1 TerC family protein -
  M3Y14_RS05845 (M3Y14_05820) mecA 1135417..1136100 (+) 684 WP_219917483.1 adaptor protein MecA Regulator
  M3Y14_RS05850 (M3Y14_05825) - 1136173..1137717 (+) 1545 WP_219917484.1 cardiolipin synthase -
  M3Y14_RS05855 (M3Y14_05830) - 1137808..1139043 (+) 1236 WP_264540339.1 competence protein CoiA -
  M3Y14_RS05860 (M3Y14_05835) pepF 1139094..1140920 (+) 1827 WP_105584252.1 oligoendopeptidase F Regulator
  M3Y14_RS05865 (M3Y14_05840) - 1141066..1141239 (-) 174 WP_000748141.1 hypothetical protein -
  M3Y14_RS05870 (M3Y14_05845) - 1141469..1142362 (-) 894 WP_219917487.1 ClpXP adapter SpxH family protein -
  M3Y14_RS05875 (M3Y14_05850) - 1142362..1142760 (-) 399 WP_219917488.1 globin -
  M3Y14_RS05880 (M3Y14_05855) - 1142945..1143523 (-) 579 WP_219917489.1 CYTH domain-containing protein -
  M3Y14_RS05885 (M3Y14_05860) - 1143668..1144039 (+) 372 WP_219917490.1 hypothetical protein -
  M3Y14_RS05890 (M3Y14_05865) - 1144070..1144708 (+) 639 WP_001081481.1 GTP pyrophosphokinase family protein -
  M3Y14_RS05895 (M3Y14_05870) - 1144727..1145524 (+) 798 WP_000673193.1 NAD kinase -

Sequence

Protein


Download         Length: 608 a.a.        Molecular weight: 70331.71 Da        Isoelectric Point: 4.6458

>NTDB_id=688150 M3Y14_RS05860 WP_105584252.1 1139094..1140920(+) (pepF) [Bacillus thuringiensis strain Bt Gxmzu777-1]
MAEQNTVKSLPNRNEIEEANTWRLEDIFQTDAEWEKEFQAIKELLPKLTEFKGKLGDSADNLLEALQYEDEISMRLGKLY
TYAHMRYDQDTTNSVYQALNDRATNLYSQVSSSTAYIVPEILSISEDTLQTFLQENRELSVYEHALEEITRQRPHVLSEA
EEALLAEASEVMSASSNTFGMLNNADLKFPSIKGEDGEEVEITHGRYIQFLESDDRRVREDAFKAVYETYGKYKNTFAST
LSGAVKRNNFNARVRKYDSARQAALSNNNIPEAVYDQLIESVNDNLHLLHRYIDIRKRALGLDELHMYDLYTPLVPEVKM
NVKYEEAQEMLLKSLNVLGDEYVEILKEAYENRWVDVYENKGKRSGAYSSGAYGTNPYILMNWHDNVNNLFTLAHEFGHS
VHSYYTRKTQPHVYGDYSIFVAEVASTCNEALLNDYLLKTTEDKKERLYLLNHYLEGFRGTVFRQTMFAEFEHIIHKKVQ
EGHAVTPDMLTEIYYDLNKKYFGDALVIDKEIGLEWSRIPHFYYNYYVYQYATGFSAATALSKQILEEGQPAVERYINEF
LKAGSSDYPIEVLKKAGVDMASPEPVKEALQVFEEKLNELEALLFEEK

Nucleotide


Download         Length: 1827 bp        

>NTDB_id=688150 M3Y14_RS05860 WP_105584252.1 1139094..1140920(+) (pepF) [Bacillus thuringiensis strain Bt Gxmzu777-1]
ATGGCTGAACAAAATACAGTAAAATCATTACCAAATCGCAATGAGATTGAAGAAGCAAACACATGGCGATTAGAAGATAT
TTTCCAAACAGATGCAGAATGGGAAAAAGAATTCCAAGCTATTAAAGAGCTATTGCCAAAGTTAACTGAATTTAAAGGGA
AGCTTGGCGACTCTGCAGACAATTTGCTTGAGGCATTGCAATATGAAGATGAAATTTCAATGCGATTAGGTAAGCTATAT
ACATATGCACATATGCGTTACGATCAAGATACAACAAACTCTGTGTATCAAGCATTAAATGATCGCGCAACAAATTTATA
CTCACAAGTATCTAGTAGCACAGCTTATATCGTACCTGAAATTTTATCTATTTCAGAAGATACATTGCAAACATTCTTAC
AAGAAAATCGAGAACTAAGTGTATATGAGCATGCATTAGAAGAAATTACACGTCAACGCCCGCACGTATTATCTGAGGCA
GAAGAAGCGTTATTAGCAGAAGCATCTGAAGTGATGAGTGCATCAAGTAATACATTCGGTATGTTGAATAATGCGGATTT
GAAATTCCCATCTATTAAAGGTGAGGATGGAGAAGAGGTAGAAATAACACATGGTCGGTACATTCAGTTTTTAGAAAGTG
ATGATCGTCGTGTACGGGAAGATGCATTCAAAGCTGTATATGAAACGTACGGGAAATATAAGAACACATTTGCAAGTACG
CTAAGTGGGGCTGTGAAACGTAATAATTTCAATGCGCGCGTTCGTAAATACGATTCTGCACGTCAAGCTGCATTAAGTAA
TAATAATATTCCTGAGGCGGTGTATGATCAACTTATTGAATCGGTAAATGATAATTTACACTTACTACATCGATACATTG
ATATTCGTAAGCGTGCTCTAGGTCTTGATGAGCTTCATATGTACGATTTATATACACCACTTGTACCAGAAGTGAAAATG
AATGTGAAGTATGAAGAAGCGCAAGAAATGTTATTGAAATCTTTAAATGTACTTGGTGATGAATATGTTGAAATTTTAAA
AGAAGCATATGAAAATCGCTGGGTAGATGTATATGAGAATAAAGGAAAACGAAGCGGAGCATATTCATCTGGTGCATACG
GAACAAATCCGTATATTTTAATGAACTGGCATGATAATGTAAATAATTTATTTACACTTGCTCATGAGTTTGGTCATTCA
GTGCATAGTTACTATACAAGGAAGACACAACCGCACGTATATGGTGATTATTCAATCTTCGTTGCAGAGGTAGCATCAAC
TTGTAATGAAGCACTTCTAAATGATTACTTATTGAAGACGACAGAAGATAAGAAAGAGCGTCTATATTTATTAAATCACT
ATTTAGAAGGTTTCCGTGGTACTGTATTCCGTCAAACAATGTTTGCAGAGTTCGAGCATATCATTCATAAAAAAGTACAA
GAAGGACATGCCGTGACGCCAGATATGTTAACGGAGATTTACTACGATTTAAATAAGAAATATTTCGGGGATGCTTTAGT
AATCGATAAAGAAATCGGTTTAGAATGGTCTCGTATTCCGCACTTCTATTACAACTATTACGTATATCAATACGCAACAG
GATTTAGTGCAGCGACAGCTTTGTCAAAACAAATTTTAGAAGAGGGACAACCAGCAGTAGAACGTTACATTAACGAATTC
TTAAAAGCTGGAAGCTCTGATTACCCAATTGAAGTGTTGAAAAAAGCAGGAGTAGATATGGCATCGCCAGAACCTGTAAA
AGAAGCATTACAAGTATTTGAAGAGAAGTTAAATGAATTAGAAGCACTATTGTTTGAAGAGAAGTAA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(120-189)

Peptidase family M3 (Peptidase_M3)

(211-591)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

50.422

97.533

0.492