Detailed information NTG0688145

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: M3Y14_RS05725
• Genome accession: NZ_CP097257
• Coordinates: 1110769..1113369 (+)
• Length: 866 a.a.
• NCBI ID: WP_219917467.1
• Uniprot ID: -
• Organism: Bacillus thuringiensis strain Bt Gxmzu777-1
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1105769..1118369

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M3Y14_RS05685 (M3Y14_05660)	-	1106260..1106523 (+)	264	WP_219917464.1	hypothetical protein	-
M3Y14_RS05690 (M3Y14_05665)	prsA	1106579..1107424 (-)	846	WP_264540334.1	peptidylprolyl isomerase PrsA	-
M3Y14_RS05695 (M3Y14_05670)	-	1107555..1107686 (-)	132	WP_001120851.1	DUF3941 domain-containing protein	-
M3Y14_RS05700 (M3Y14_05675)	-	1107787..1108644 (+)	858	WP_219917466.1	YitT family protein	-
M3Y14_RS05705 (M3Y14_05680)	-	1108671..1108868 (-)	198	WP_098778083.1	DUF3813 domain-containing protein	-
M3Y14_RS05710 (M3Y14_05685)	-	1108869..1109009 (-)	141	WP_002170819.1	hypothetical protein	-
M3Y14_RS05715 (M3Y14_05690)	-	1109116..1109925 (-)	810	WP_105584269.1	Cof-type HAD-IIB family hydrolase	-
M3Y14_RS05720 (M3Y14_05695)	-	1110417..1110596 (+)	180	WP_002117000.1	YjzC family protein	-
M3Y14_RS05725 (M3Y14_05700)	clpC	1110769..1113369 (+)	2601	WP_219917467.1	ATP-dependent chaperone ClpB	Regulator
M3Y14_RS05730 (M3Y14_05705)	-	1113401..1113583 (-)	183	WP_001211111.1	YjzD family protein	-
M3Y14_RS05735 (M3Y14_05710)	-	1113740..1114474 (+)	735	WP_219917468.1	alpha/beta hydrolase	-
M3Y14_RS05740 (M3Y14_05715)	-	1114504..1115376 (+)	873	WP_264541160.1	NAD-dependent epimerase/dehydratase family protein	-
M3Y14_RS05745 (M3Y14_05720)	comZ	1115441..1115617 (+)	177	WP_193645655.1	ComZ family protein	Regulator
M3Y14_RS05750 (M3Y14_05725)	fabH	1115880..1116812 (+)	933	WP_001100550.1	beta-ketoacyl-ACP synthase III	-
M3Y14_RS05755 (M3Y14_05730)	fabF	1116844..1118082 (+)	1239	WP_219917471.1	beta-ketoacyl-ACP synthase II	-

Sequence

Protein

• Length: 866 a.a.
• Molecular weight: 97582.71 Da
• Isoelectric Point: 5.1983

>NTDB_id=688145 M3Y14_RS05725 WP_219917467.1 1110769..1113369(+) (clpC) [Bacillus thuringiensis strain Bt Gxmzu777-1]
MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLTLLEQQEGLTVRIFQKMNVDIEALKQGVESLIKKKPSVTGSGAE
AGKLYVTGALQQLLVRAGKEAEKLQDDYISIEHVLLAFSEEKGDINQLFTKFHITKDNLLQSLMTVRGNQRVTSQNPEAT
YEALEKYGRDLVAEVRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDRTI
FALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGATTLD
EYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEA
CATIRTEIDSMPTELDEVTRRIMQLEIEEAALGKEKDLGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHKVRDLRE
HLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLREEVSEEEIADIVSRWTGIPVAKLVEG
EREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQTLFDSEEQMIRIDM
SEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVI
IMTSNIGSAHLLEGLEEDGSIKEESRELVMGQLKGHFRPEFLNRVDEIILFKPLTRNEIKGIVDKIVQELQGRLADRHIS
LELTEPAKEFVVEAGFDPMYGARPLKRYVQRQVETKLARELIAGTITDNSHVVVDVENNELVVHVK

Nucleotide

• Length: 2601 bp

>NTDB_id=688145 M3Y14_RS05725 WP_219917467.1 1110769..1113369(+) (clpC) [Bacillus thuringiensis strain Bt Gxmzu777-1]
ATGGACTTAAATCAAATGACAACAAAAACACAGGAAGCGATTATGAGTGCTCAATCTTTAGCGGTATCTCATCATCATCA
AGAAGTAGATACTGTTCATTTATTGCTTACATTATTAGAGCAGCAAGAAGGATTAACAGTACGTATTTTTCAAAAAATGA
ATGTCGATATAGAAGCGTTAAAGCAAGGTGTAGAAAGTTTAATTAAGAAAAAGCCTTCTGTAACTGGAAGCGGGGCAGAG
GCAGGGAAATTATATGTAACAGGTGCTTTGCAACAACTGCTTGTGAGAGCAGGAAAAGAAGCGGAAAAATTACAAGATGA
TTATATTTCAATAGAACATGTATTGCTTGCTTTTTCTGAAGAAAAAGGCGATATAAATCAATTATTTACAAAATTTCATA
TTACGAAAGATAACTTATTACAGTCTTTAATGACAGTTCGGGGGAATCAAAGAGTGACTAGTCAAAATCCAGAAGCAACT
TATGAAGCGTTAGAAAAATATGGCCGTGATTTAGTGGCTGAAGTAAGAGCGGGGAAAATTGACCCTGTAATTGGCCGAGA
TAGTGAAATTCGCCGCGTGATCCGCATTCTTTCACGTAAAACGAAAAATAACCCTGTTTTAATCGGGGAACCAGGTGTTG
GTAAAACAGCAATCGTTGAAGGATTAGCGCAGCGTATTGTGAAAAAAGATGTCCCAGAAGGATTAAAAGATCGAACAATT
TTCGCTTTAGATATGAGTGCACTTGTGGCTGGAGCTAAATTCCGCGGTGAGTTTGAAGAGCGCCTGCAAGCTGTATTAAA
TGAAATTAAAAAGAGTGAAGGCCGCATTTTATTATTCATTGATGAACTTCATACAATCGTCGGCGCTGGTAAAACAGAAG
GAGCAATGGATGCAGGAAATATGTTAAAACCCATGCTAGCGCGTGGTGAACTGCATTGTATCGGGGCAACGACATTAGAT
GAATACCGTAAATATATTGAGAAAGATCCAGCGTTAGAAAGACGTTTCCAACAAGTATTAGCAGAAGAGCCAACTGTTGA
GGATACAATTTCCATTTTACGTGGTTTAAAAGAGCGTTTTGAAATTTATCACGGTGTAAATATTCATGACCGCGCGATTG
TAGCGGCATCTGTTTTATCAGATCGATATATTTCAGATCGTTTTTTGCCCGATAAAGCAATTGATCTTGTTGATGAAGCT
TGTGCAACAATTCGAACAGAAATTGATTCTATGCCAACAGAATTAGATGAAGTAACGCGCCGCATTATGCAGTTGGAAAT
TGAAGAAGCTGCTCTTGGGAAAGAAAAGGACTTAGGTAGTCAAGAGCGCCTAAAAACATTGCAACGTGAATTATCGGATT
TAAAAGAAGTTGCAAGTAGTATGAGAGCGAAATGGGAGAAAGAAAAAGAAGACATTCATAAAGTGCGTGACTTGCGTGAA
CATTTAGAGCGCTTGCGCCGTGAGTTAGAAGAAGCAGAAGGAAATTACGATTTAAATAAAGCAGCTGAGCTTCGCCACGG
GAAAATTCCAGCTATCGAAAAAGAGTTAAAAGAAGCGGAAGAGATGGGGGCACATAATAAACAAGAGAATCGTTTATTAC
GCGAGGAAGTAAGTGAAGAAGAAATTGCAGACATCGTTTCAAGGTGGACTGGTATTCCTGTCGCAAAACTCGTTGAAGGT
GAACGTGAGAAATTATTACGTCTTGAACAAATTTTATCAGAGCGTGTTATCGGTCAAGAGGAAGCGGTAAGCCTTGTATC
AGACGCAGTACTTCGTGCTCGTGCTGGCATTAAAGATCCGAATCGTCCAATTGGTTCATTCATTTTCTTAGGTCCTACAG
GTGTTGGTAAAACTGAGCTTGCAAAAACGTTAGCACAAACGTTATTTGACAGTGAAGAGCAAATGATTCGTATCGATATG
TCTGAGTATATGGAGAAACACGCAGTGTCACGCTTAATTGGTGCGCCTCCTGGATATGTTGGATATGAAGAAGGCGGACA
ATTAACAGAAGCAGTAAGACGTAAACCGTATTCTGTTATTTTGTTAGATGAAATCGAAAAAGCACATCCAGAAGTATTCA
ACATTTTATTACAAATGTTAGACGATGGACGTATTACAGATTCACAAGGACGTACAGTAGACTTTAAAAACACGGTTATT
ATTATGACTTCAAATATTGGATCTGCTCACTTATTAGAAGGGCTAGAAGAAGATGGTTCTATTAAAGAAGAGTCAAGAGA
ACTTGTAATGGGACAATTAAAAGGACATTTCCGACCAGAATTCTTAAACCGTGTCGATGAAATTATTTTATTCAAACCTC
TTACAAGGAATGAAATTAAAGGTATTGTTGATAAGATTGTACAAGAATTACAAGGGCGTTTAGCAGATCGTCATATATCA
TTAGAATTGACGGAACCTGCAAAAGAATTTGTTGTAGAAGCTGGATTCGATCCGATGTACGGAGCTCGTCCGTTAAAACG
ATACGTACAGCGTCAAGTTGAGACAAAATTAGCGAGAGAATTGATTGCAGGAACGATTACTGATAATAGTCACGTAGTTG
TCGATGTAGAAAATAATGAATTAGTTGTTCATGTAAAGTAA

Domains

Predicted by InterproScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (206-339)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (774-854)

• AAA lid domain (AAA_lid_9) (345-447)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (97-148)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (17-68)

• AAA domain (Cdc48 subfamily) (AAA_2) (602-768)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Bacillus subtilis subsp. subtilis str. 168	47.657	100	0.482
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	40.092	100	0.404
clpC	Lactococcus lactis subsp. cremoris KW2	47.265	82.333	0.389