Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   OS079_RS00095 Genome accession   NZ_CP113042
Coordinates   18747..19565 (-) Length   272 a.a.
NCBI ID   WP_267837932.1    Uniprot ID   -
Organism   Staphylococcus aureus strain Seraphine     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 13747..24565
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OS079_RS00075 - 14840..15817 (+) 978 WP_000379098.1 metal-dependent hydrolase -
  OS079_RS00080 - 16078..16914 (-) 837 WP_000886468.1 membrane protein -
  OS079_RS00085 - 16923..18440 (-) 1518 WP_000535834.1 ABC transporter ATP-binding protein -
  OS079_RS00090 - 18455..18769 (-) 315 WP_000435806.1 YfhH family protein -
  OS079_RS00095 recX 18747..19565 (-) 819 WP_267837932.1 recombination regulator RecX Regulator
  OS079_RS00100 sgtB 19826..20635 (-) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  OS079_RS00105 - 20976..21491 (-) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  OS079_RS00110 - 21622..21783 (-) 162 WP_001005407.1 SE1561 family protein -
  OS079_RS00115 yfkAB 22007..23158 (+) 1152 WP_001089613.1 radical SAM/CxCxxxxC motif protein YfkAB -
  OS079_RS00120 - 23418..23948 (-) 531 WP_000184383.1 acyl-CoA thioesterase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32269.12 Da        Isoelectric Point: 5.9211

>NTDB_id=688138 OS079_RS00095 WP_267837932.1 18747..19565(-) (recX) [Staphylococcus aureus strain Seraphine]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEIFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHVVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=688138 OS079_RS00095 WP_267837932.1 18747..19565(-) (recX) [Staphylococcus aureus strain Seraphine]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGGTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATTGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATATTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAAGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGTTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.632

100

0.996