Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   OS086_RS09405 Genome accession   NZ_CP113039
Coordinates   1865743..1866417 (+) Length   224 a.a.
NCBI ID   WP_001166500.1    Uniprot ID   Q99VW2
Organism   Staphylococcus aureus strain Gwen     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1860743..1871417
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OS086_RS09380 - 1860958..1862025 (+) 1068 WP_000980137.1 membrane protein -
  OS086_RS09385 - 1862176..1863219 (+) 1044 WP_267810995.1 alpha/beta hydrolase -
  OS086_RS09390 - 1863548..1863976 (+) 429 WP_000198504.1 hypothetical protein -
  OS086_RS09395 - 1864185..1864691 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  OS086_RS09400 graX 1864804..1865727 (+) 924 WP_000802955.1 auxiliary protein GraX/ApsX -
  OS086_RS09405 braR 1865743..1866417 (+) 675 WP_001166500.1 response regulator transcription factor GraR/ApsR Regulator
  OS086_RS09410 graS 1866410..1867450 (+) 1041 WP_001061264.1 histidine kinase GraS/ApsS -
  OS086_RS09415 vraF 1867594..1868355 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  OS086_RS09420 vraG 1868345..1870234 (+) 1890 WP_000143615.1 ABC transporter permease VraG -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26065.87 Da        Isoelectric Point: 4.3563

>NTDB_id=688087 OS086_RS09405 WP_001166500.1 1865743..1866417(+) (braR) [Staphylococcus aureus strain Gwen]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=688087 OS086_RS09405 WP_001166500.1 1865743..1866417(+) (braR) [Staphylococcus aureus strain Gwen]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCTTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(149-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q99VW2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397