Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   M1V99_RS08230 Genome accession   NZ_CP097255
Coordinates   1630465..1631091 (+) Length   208 a.a.
NCBI ID   WP_041910603.1    Uniprot ID   A0A8E1RPS6
Organism   Enterobacter bugandensis strain CMCC(B)45301     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1625465..1636091
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M1V99_RS08210 (M1V99_08210) - 1625866..1627626 (-) 1761 WP_069732531.1 AAA family ATPase -
  M1V99_RS08215 (M1V99_08215) matP 1627812..1628264 (+) 453 WP_023332611.1 macrodomain Ter protein MatP -
  M1V99_RS08220 (M1V99_08220) ompA 1628328..1629383 (-) 1056 WP_108780329.1 porin OmpA -
  M1V99_RS08225 (M1V99_08225) sulA 1629738..1630247 (-) 510 WP_041910604.1 SOS-induced cell division inhibitor SulA -
  M1V99_RS08230 (M1V99_08230) sxy/tfoX 1630465..1631091 (+) 627 WP_041910603.1 TfoX/Sxy family DNA transformation protein Regulator
  M1V99_RS08235 (M1V99_08235) yccS 1631048..1633210 (-) 2163 WP_041910602.1 YccS family putative transporter -
  M1V99_RS08240 (M1V99_08240) - 1633230..1633676 (-) 447 WP_041910601.1 YccF domain-containing protein -
  M1V99_RS08245 (M1V99_08245) helD 1633800..1635854 (+) 2055 WP_194386218.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23988.61 Da        Isoelectric Point: 9.2151

>NTDB_id=688080 M1V99_RS08230 WP_041910603.1 1630465..1631091(+) (sxy/tfoX) [Enterobacter bugandensis strain CMCC(B)45301]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSEGELYLRACEESAKYCVKNAASFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSTFALNAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARESWLKMRAKN
KALSIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPLENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=688080 M1V99_RS08230 WP_041910603.1 1630465..1631091(+) (sxy/tfoX) [Enterobacter bugandensis strain CMCC(B)45301]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTGTCACCACTGGGTGAAATTCATCATCGCGCGCT
TTTCGGCGGCTATACCCTGGCAGTGGATGATGCGGTTTTTGCCATGGTGTCAGAAGGTGAGCTCTACCTCCGCGCCTGTG
AAGAAAGTGCGAAATACTGTGTGAAAAATGCCGCGTCTTTTTTGACCCTGATGAAGCGGGGCCGTCCGGTGCTTCTCAAC
TATTACCGGGTGGATGACGGGCTATGGCAGGACAGGGAGCGTCTGCTTCAGCTCTCCACTTTCGCACTTAATGCGGCAAG
AAAAGAGCGTTACCAGCGGCATCAGCGCAATCGACTTAAGGACCTGCCAAACCTGACCTTTCAGCTGGAAGTGTTGCTCT
TTGAAGCGGGCATCACCAACGAAGAAACGCTGCGGGCGCTTGGCGCAAGGGAGAGCTGGCTGAAGATGCGGGCGAAAAAT
AAAGCGCTGAGTATCAAAGTGCTATTCGCGCTGGAAGGGGCGATCGAGGGGCTGCATGAGGCGGCACTCCCGGCCGGCAT
TCGCCGGGAGTTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACTGGAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.081

95.192

0.553