Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   M3N36_RS02220 Genome accession   NZ_CP097251
Coordinates   429773..430582 (+) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain 21SPY7071 isolate cerebral abscess     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 424773..435582
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M3N36_RS02200 (M3N36_02200) - 425215..426462 (+) 1248 WP_030127187.1 AMP-binding protein -
  M3N36_RS02205 (M3N36_02205) - 426518..427552 (+) 1035 WP_011284595.1 DUF3114 domain-containing protein -
  M3N36_RS02210 (M3N36_02210) vicR 427714..428424 (+) 711 WP_002985645.1 response regulator YycF Regulator
  M3N36_RS02215 (M3N36_02215) vicK 428417..429769 (+) 1353 WP_002985643.1 cell wall metabolism sensor histidine kinase VicK Regulator
  M3N36_RS02220 (M3N36_02220) vicX 429773..430582 (+) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  M3N36_RS02225 (M3N36_02225) rnc 431014..431706 (+) 693 WP_002985639.1 ribonuclease III -
  M3N36_RS02230 (M3N36_02230) smc 431707..435246 (+) 3540 WP_030127188.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=688030 M3N36_RS02220 WP_002985641.1 429773..430582(+) (vicX) [Streptococcus pyogenes strain 21SPY7071 isolate cerebral abscess]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=688030 M3N36_RS02220 WP_002985641.1 429773..430582(+) (vicX) [Streptococcus pyogenes strain 21SPY7071 isolate cerebral abscess]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758