Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   OS083_RS00600 Genome accession   NZ_CP113027
Coordinates   45147..45950 (-) Length   267 a.a.
NCBI ID   WP_001134191.1    Uniprot ID   -
Organism   Staphylococcus aureus strain Syndra     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 40147..50950
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OS083_RS00575 metG 40444..42417 (-) 1974 WP_001051120.1 methionine--tRNA ligase -
  OS083_RS00580 rsmI 42702..43541 (-) 840 WP_000279919.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  OS083_RS00585 - 43543..43791 (-) 249 WP_000377064.1 GIY-YIG nuclease family protein -
  OS083_RS00590 - 43784..44509 (-) 726 WP_000910687.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  OS083_RS00595 yabA 44783..45130 (-) 348 WP_000375686.1 DNA replication initiation control protein YabA -
  OS083_RS00600 yaaT 45147..45950 (-) 804 WP_001134191.1 PSP1 domain-containing protein Regulator
  OS083_RS00605 - 45951..46877 (-) 927 WP_000344330.1 DNA polymerase III subunit delta' C-terminal domain-containing protein -
  OS083_RS00610 - 47091..47420 (-) 330 WP_000781979.1 cyclic-di-AMP receptor -
  OS083_RS00615 tmk 47448..48065 (-) 618 WP_001272126.1 dTMP kinase -
  OS083_RS00620 - 48067..49404 (-) 1338 WP_000812840.1 aminotransferase class V-fold PLP-dependent enzyme -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 30218.86 Da        Isoelectric Point: 4.5759

>NTDB_id=687687 OS083_RS00600 WP_001134191.1 45147..45950(-) (yaaT) [Staphylococcus aureus strain Syndra]
MPNVIGVQFQKAGKLEYYTPNDIQVDIDDWVVVESKRGIEIGIVKNPLMDIAEEDVVLPLKNIIRIADDKDIDKFNCNER
DAENALILCKDIVREQGLDMRLVNCEYTLDKSKVIFNFTADDRIDFRKLVKILAQHLKTRIELRQIGVRDEAKLLGGIGP
CGRSLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGACGRLMCCLKYENDYYEEVRAQLPDIGEAIETPDGNGKVVALNI
LDISMQVKLEGHEQPLEYKLEEIETMH

Nucleotide


Download         Length: 804 bp        

>NTDB_id=687687 OS083_RS00600 WP_001134191.1 45147..45950(-) (yaaT) [Staphylococcus aureus strain Syndra]
ATGCCAAATGTAATAGGTGTTCAGTTTCAAAAAGCGGGAAAATTAGAATATTATACACCTAATGATATACAAGTAGATAT
AGATGACTGGGTAGTTGTCGAATCTAAAAGAGGCATAGAGATAGGTATTGTTAAAAATCCATTAATGGATATTGCTGAAG
AGGATGTTGTGTTACCTCTTAAAAATATTATTCGCATTGCTGATGACAAAGATATTGATAAATTTAATTGTAATGAACGA
GATGCTGAAAATGCATTAATACTATGTAAAGACATTGTAAGAGAACAAGGTTTGGACATGCGTTTAGTCAATTGCGAATA
TACATTAGATAAATCGAAAGTTATTTTTAATTTTACGGCGGATGATCGTATTGATTTTAGAAAATTAGTAAAAATATTAG
CGCAACATTTAAAAACACGTATCGAGTTGAGACAAATTGGTGTAAGGGATGAAGCCAAATTGCTTGGCGGTATCGGACCT
TGTGGTAGGTCGTTATGTTGTTCTACATTTTTAGGAGATTTTGAACCAGTATCGATTAAGATGGCTAAGGATCAAAATTT
ATCATTAAATCCAACTAAAATTTCCGGTGCATGTGGTCGTTTGATGTGTTGTTTAAAATATGAAAATGACTACTATGAGG
AAGTACGTGCACAATTACCTGATATTGGTGAAGCAATTGAAACGCCTGATGGTAACGGGAAAGTAGTTGCTTTAAATATA
TTAGACATTTCTATGCAGGTGAAGCTTGAGGGACACGAACAGCCACTTGAATATAAATTAGAAGAAATAGAAACTATGCA
TTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

62.738

98.502

0.618