Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   MX657_RS08135 Genome accession   NZ_CP097173
Coordinates   1704068..1704694 (+) Length   208 a.a.
NCBI ID   WP_346808009.1    Uniprot ID   -
Organism   Enterobacter chuandaensis strain E20191216     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1699068..1709694
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MX657_RS08115 (MX657_08105) - 1699468..1701228 (-) 1761 WP_346808007.1 Lon protease family protein -
  MX657_RS08120 (MX657_08110) matP 1701415..1701867 (+) 453 WP_023332611.1 macrodomain Ter protein MatP -
  MX657_RS08125 (MX657_08115) ompA 1701931..1702986 (-) 1056 WP_108780329.1 porin OmpA -
  MX657_RS08130 (MX657_08120) sulA 1703341..1703850 (-) 510 WP_080327670.1 SOS-induced cell division inhibitor SulA -
  MX657_RS08135 (MX657_08125) sxy/tfoX 1704068..1704694 (+) 627 WP_346808009.1 TfoX/Sxy family DNA transformation protein Regulator
  MX657_RS08140 (MX657_08130) yccS 1704651..1706813 (-) 2163 WP_346808011.1 YccS family putative transporter -
  MX657_RS08145 (MX657_08135) - 1706833..1707279 (-) 447 WP_346808012.1 YccF domain-containing protein -
  MX657_RS08150 (MX657_08140) helD 1707403..1709457 (+) 2055 WP_346808014.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23951.46 Da        Isoelectric Point: 9.2151

>NTDB_id=687608 MX657_RS08135 WP_346808009.1 1704068..1704694(+) (sxy/tfoX) [Enterobacter chuandaensis strain E20191216]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNAASFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLKLSSFALNAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARESWLKMRAKN
NALSIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPESQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=687608 MX657_RS08135 WP_346808009.1 1704068..1704694(+) (sxy/tfoX) [Enterobacter chuandaensis strain E20191216]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCGCCGTTGGGTGAAATTCACCATCGCGCGCT
GTTCGGCGGCTATACCCTGGCAGTGGATGATGCGGTTTTTGCCATGGTGTCAGACGGTGAGCTCTACCTTCGCGCCTGTG
AAGAAAGCGCGAAATACTGTGTCAAAAATGCTGCCTCTTTTTTGACGCTAATGAAGCGGGGACGTCCGGTGCTTCTCAAC
TACTATCGCGTGGATGATGGGCTGTGGCAGGACAGGGAGCGTCTGCTTAAGCTCTCCTCATTTGCGCTCAATGCGGCAAG
GAAAGAGCGTTATCAGCGGCATCAGCGAAACCGCCTTAAAGATCTGCCAAACCTGACTTTTCAGCTGGAAGTGTTGCTCT
TCGAAGCAGGTATTACTAATGAAGAGACGCTGCGGGCGCTAGGGGCCAGGGAGAGCTGGCTGAAGATGCGGGCAAAAAAT
AATGCGCTCAGTATTAAAGTGCTCTTCGCGCTGGAAGGGGCCATTGAGGGGCTGCATGAGGCGGCACTCCCGGCAGGTAT
TCGCCGGGAGTTGACGGAGTGGTTTAATGCGCTGCCTGAGTCACAGGAGAATCACTCTTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567