Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   OS077_RS14180 Genome accession   NZ_CP113016
Coordinates   2828902..2829642 (-) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain Azir     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2823902..2834642
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OS077_RS14155 hemH 2824778..2825701 (-) 924 WP_000162881.1 ferrochelatase -
  OS077_RS14160 hemE 2825759..2826796 (-) 1038 WP_000233526.1 uroporphyrinogen decarboxylase -
  OS077_RS14165 - 2826786..2826896 (-) 111 WP_001790154.1 hypothetical protein -
  OS077_RS14170 traP 2827059..2827562 (+) 504 WP_000737978.1 signal transduction protein TRAP -
  OS077_RS14175 ecsB 2827686..2828909 (-) 1224 WP_000551839.1 ABC transporter permease EcsB -
  OS077_RS14180 pptA 2828902..2829642 (-) 741 WP_000216874.1 ABC transporter ATP-binding protein EcsA Regulator
  OS077_RS14185 - 2829776..2830198 (+) 423 WP_000004986.1 HIT family protein -
  OS077_RS14190 - 2830340..2830705 (+) 366 WP_000648118.1 YtxH domain-containing protein -
  OS077_RS14195 - 2831438..2831995 (+) 558 WP_000477960.1 DUF3267 domain-containing protein -
  OS077_RS14200 - 2832200..2833162 (+) 963 WP_000782121.1 foldase protein PrsA -
  OS077_RS14205 yhaM 2833283..2834224 (-) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=687593 OS077_RS14180 WP_000216874.1 2828902..2829642(-) (pptA) [Staphylococcus aureus strain Azir]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=687593 OS077_RS14180 WP_000216874.1 2828902..2829642(-) (pptA) [Staphylococcus aureus strain Azir]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATTGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545