Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   OS077_RS06110 Genome accession   NZ_CP113016
Coordinates   1248459..1249304 (+) Length   281 a.a.
NCBI ID   WP_001566903.1    Uniprot ID   -
Organism   Staphylococcus aureus strain Azir     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1243459..1254304
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OS077_RS06095 - 1243725..1245566 (-) 1842 WP_000077317.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -
  OS077_RS06100 metC 1245535..1246695 (-) 1161 WP_000175852.1 cystathionine beta-lyase MetC -
  OS077_RS06105 - 1246692..1247795 (-) 1104 WP_000655707.1 PLP-dependent transferase -
  OS077_RS06110 spo0J 1248459..1249304 (+) 846 WP_001566903.1 ParB/RepB/Spo0J family partition protein Regulator
  OS077_RS06115 - 1249461..1250342 (+) 882 WP_001077602.1 mechanosensitive ion channel family protein -
  OS077_RS06120 - 1250372..1250575 (+) 204 WP_000157345.1 DUF951 domain-containing protein -
  OS077_RS06125 ychF 1250587..1251684 (+) 1098 WP_001218732.1 redox-regulated ATPase YchF -
  OS077_RS06130 - 1251770..1251961 (-) 192 WP_001052483.1 hypothetical protein -
  OS077_RS06135 rpsF 1252205..1252501 (+) 297 WP_001261460.1 30S ribosomal protein S6 -
  OS077_RS06140 ssbA 1252522..1253025 (+) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  OS077_RS06145 rpsR 1253077..1253319 (+) 243 WP_000897044.1 30S ribosomal protein S18 -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32869.88 Da        Isoelectric Point: 10.0091

>NTDB_id=687526 OS077_RS06110 WP_001566903.1 1248459..1249304(+) (spo0J) [Staphylococcus aureus strain Azir]
MSELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGTKVDISIKKSVGKISFEFDSQEDFLRIIEQLNRRYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=687526 OS077_RS06110 WP_001566903.1 1248459..1249304(+) (spo0J) [Staphylococcus aureus strain Azir]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGCAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGAATTTTGCAACCAATTGTGCTTAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTGCCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTTAGATATTTAGAAAACCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAAGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGTACCAAAGTAGATATATCAATAAAAAAATCGGTTGGTAAAATCTCATTTGAGTTTGATTCACAAGAAGA
TTTTCTAAGAATAATTGAACAATTAAATCGTAGGTATGGTAAATAG

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(161-210)

ParB/Sulfiredoxin domain (ParB_N)

(22-109)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.379

92.883

0.384