Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   OS077_RS01130 Genome accession   NZ_CP113016
Coordinates   219807..220277 (+) Length   156 a.a.
NCBI ID   WP_000164421.1    Uniprot ID   P65329
Organism   Staphylococcus aureus strain Azir     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 214807..225277
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OS077_RS01110 coaW 215116..215919 (+) 804 WP_000862727.1 type II pantothenate kinase -
  OS077_RS01115 - 216049..216720 (-) 672 WP_000120549.1 DUF2750 domain-containing protein -
  OS077_RS01120 ldmS 217119..218312 (-) 1194 WP_031590228.1 L-aspartate--L-methionine ligase LdmS -
  OS077_RS01125 - 218312..219496 (-) 1185 WP_267836811.1 M20 family metallopeptidase -
  OS077_RS01130 luxS 219807..220277 (+) 471 WP_000164421.1 S-ribosylhomocysteine lyase Regulator
  OS077_RS01135 - 220429..220779 (-) 351 WP_267836813.1 hypothetical protein -
  OS077_RS01140 - 220793..222094 (-) 1302 WP_001242319.1 pyrimidine-nucleoside phosphorylase -
  OS077_RS01145 deoC 222373..223035 (-) 663 WP_001083325.1 deoxyribose-phosphate aldolase -
  OS077_RS01150 deoD 223350..224060 (+) 711 WP_000160304.1 purine-nucleoside phosphorylase -
  OS077_RS01155 - 224181..224624 (-) 444 WP_000070866.1 Dps family protein -
  OS077_RS01160 - 224824..225237 (-) 414 WP_267836814.1 thiol-disulfide oxidoreductase DCC family protein -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 17513.76 Da        Isoelectric Point: 5.4567

>NTDB_id=687515 OS077_RS01130 WP_000164421.1 219807..220277(+) (luxS) [Staphylococcus aureus strain Azir]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=687515 OS077_RS01130 WP_000164421.1 219807..220277(+) (luxS) [Staphylococcus aureus strain Azir]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAAGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCAG
GACTACATTCATTAGAACATTTAATGGCTGAAAATATTAGGAATCATAGTGACAAAGTTGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(5-148)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65329

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

44.681

90.385

0.404