Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   OS078_RS07160 Genome accession   NZ_CP113015
Coordinates   1408769..1409443 (+) Length   224 a.a.
NCBI ID   WP_001166505.1    Uniprot ID   Q2FIY0
Organism   Staphylococcus aureus strain Zed     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1403769..1414443
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OS078_RS07135 - 1403984..1405051 (+) 1068 WP_000980134.1 membrane protein -
  OS078_RS07140 - 1405202..1406245 (+) 1044 WP_001030771.1 alpha/beta hydrolase -
  OS078_RS07145 - 1406574..1407002 (+) 429 WP_000198504.1 hypothetical protein -
  OS078_RS07150 - 1407211..1407717 (-) 507 WP_000940134.1 GNAT family N-acetyltransferase -
  OS078_RS07155 graX 1407830..1408753 (+) 924 WP_000802946.1 auxiliary protein GraX/ApsX -
  OS078_RS07160 braR 1408769..1409443 (+) 675 WP_001166505.1 response regulator transcription factor GraR/ApsR Regulator
  OS078_RS07165 graS 1409436..1410476 (+) 1041 WP_001061252.1 histidine kinase GraS/ApsS -
  OS078_RS07170 vraF 1410620..1411381 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  OS078_RS07175 vraG 1411371..1413260 (+) 1890 WP_000143623.1 ABC transporter permease VraG -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26078.92 Da        Isoelectric Point: 4.3968

>NTDB_id=687435 OS078_RS07160 WP_001166505.1 1408769..1409443(+) (braR) [Staphylococcus aureus strain Zed]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=687435 OS078_RS07160 WP_001166505.1 1408769..1409443(+) (braR) [Staphylococcus aureus strain Zed]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCGTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGATCAGACGATTTTCCTGTCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q2FIY0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.909

98.214

0.402