Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   M2M89_RS11930 Genome accession   NZ_CP097130
Coordinates   2356845..2357648 (-) Length   267 a.a.
NCBI ID   WP_128441713.1    Uniprot ID   -
Organism   Bacillus subtilis strain S16     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2351845..2362648
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M2M89_RS11905 glpQ 2352981..2353712 (-) 732 WP_128441710.1 glycerophosphodiester phosphodiesterase -
  M2M89_RS11910 yqiI 2353791..2354411 (-) 621 WP_072173938.1 N-acetylmuramoyl-L-alanine amidase -
  M2M89_RS11915 - 2354431..2354727 (-) 297 WP_014480225.1 hypothetical protein -
  M2M89_RS11920 - 2355035..2355187 (+) 153 WP_014480226.1 hypothetical protein -
  M2M89_RS11925 yqiG 2355260..2356378 (+) 1119 WP_128441712.1 NADH-dependent flavin oxidoreductase -
  M2M89_RS11930 spo0A 2356845..2357648 (-) 804 WP_128441713.1 sporulation transcription factor Spo0A Regulator
  M2M89_RS11935 spoIVB 2357924..2359204 (-) 1281 WP_004398697.1 SpoIVB peptidase -
  M2M89_RS11940 recN 2359379..2361109 (-) 1731 WP_029726732.1 DNA repair protein RecN Machinery gene
  M2M89_RS11945 argR 2361146..2361595 (-) 450 WP_003230265.1 arginine repressor ArgR -
  M2M89_RS11950 yqxC 2361693..2362538 (-) 846 WP_128441715.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29718.21 Da        Isoelectric Point: 6.3913

>NTDB_id=687430 M2M89_RS11930 WP_128441713.1 2356845..2357648(-) (spo0A) [Bacillus subtilis strain S16]
MEKIKVCVADDNRELVSLLSEYIEGQEDMEVIGVAYNGQECLSLFKEKDPDVLVLDIIMPHLDGLAVLERLRESDLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNASSVTHRAPSSQSSIIRNSQPEPKKKNLDASITSI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=687430 M2M89_RS11930 WP_128441713.1 2356845..2357648(-) (spo0A) [Bacillus subtilis strain S16]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTGGTAAGCCTGTTAAGTGAATATATAGAAGGACAGGA
AGACATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGCCTGTCGCTGTTTAAAGAAAAAGATCCCGATGTGCTCG
TATTAGATATTATTATGCCGCATTTAGACGGACTTGCGGTTTTAGAGAGGCTGAGGGAATCAGATCTGAAAAAACAGCCG
AATGTCATTATGCTGACAGCCTTTGGGCAGGAAGATGTCACGAAAAAGGCCGTCGATTTAGGCGCGTCCTACTTTATTCT
CAAACCGTTTGATATGGAAAACCTTGTCGGTCATATCCGCCAGGTCAGCGGAAATGCCAGCAGTGTGACGCATCGTGCGC
CATCATCGCAAAGCAGTATTATACGCAACAGCCAGCCTGAACCAAAGAAGAAAAATCTCGACGCGAGCATCACAAGCATT
ATCCATGAAATCGGCGTCCCAGCCCATATTAAAGGCTATCTCTATCTGCGCGAAGCAATCTCAATGGTATACAATGACAT
CGAATTGCTCGGCAGCATTACAAAAGTTCTCTATCCGGACATCGCCAAAAAATTCAACACAACCGCAAGCCGTGTAGAAA
GAGCGATCCGCCATGCAATTGAAGTGGCATGGAGCAGAGGAAACATTGATTCCATTTCCTCGTTGTTCGGTTATACTGTC
AGCATGACAAAAGCTAAACCGACAAATTCGGAGTTCATCGCAATGGTTGCGGATAAGCTGAGATTAGAACATAAGGCTTC
TTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

99.625

100

0.996