Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   M2M89_RS07515 Genome accession   NZ_CP097130
Coordinates   1446832..1447296 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain S16     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1441832..1452296
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M2M89_RS07495 kinA 1442299..1444119 (+) 1821 WP_015252197.1 sporulation histidine kinase KinA -
  M2M89_RS07500 dapX 1444129..1445310 (-) 1182 WP_121591741.1 aminotransferase A -
  M2M89_RS07505 - 1445512..1445673 (-) 162 WP_003245246.1 hypothetical protein -
  M2M89_RS07510 cheV 1445877..1446788 (+) 912 WP_009967126.1 chemotaxis protein CheV -
  M2M89_RS07515 kre 1446832..1447296 (-) 465 WP_003232406.1 YkyB family protein Regulator
  M2M89_RS07520 ykuC 1447422..1448714 (-) 1293 WP_128441601.1 MFS transporter -
  M2M89_RS07525 ltdD 1448790..1449284 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  M2M89_RS07530 ppeE 1449341..1450201 (-) 861 WP_003232400.1 metallophosphoesterase -
  M2M89_RS07535 fadH 1450344..1451108 (+) 765 WP_041850885.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=687421 M2M89_RS07515 WP_003232406.1 1446832..1447296(-) (kre) [Bacillus subtilis strain S16]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=687421 M2M89_RS07515 WP_003232406.1 1446832..1447296(-) (kre) [Bacillus subtilis strain S16]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGAGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1