Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   M2M89_RS04485 Genome accession   NZ_CP097130
Coordinates   893644..894438 (+) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus subtilis strain S16     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 888644..899438
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M2M89_RS04455 sxzA 889483..890514 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  M2M89_RS04460 yfhB 890629..891510 (+) 882 WP_041851150.1 PhzF family phenazine biosynthesis isomerase -
  M2M89_RS04465 yfhC 891598..892182 (+) 585 WP_015252518.1 NAD(P)H nitroreductase -
  M2M89_RS04470 yfhD 892221..892412 (-) 192 WP_041851149.1 YfhD family protein -
  M2M89_RS04475 yfhE 892479..892589 (-) 111 WP_003223230.1 YfhE family protein -
  M2M89_RS04480 yfhF 892644..893555 (-) 912 WP_041851148.1 TIGR01777 family oxidoreductase -
  M2M89_RS04485 recX 893644..894438 (+) 795 WP_029726844.1 recombination regulator RecX Regulator
  M2M89_RS04490 yfhH 894440..894754 (+) 315 WP_003244592.1 YfhH family protein -
  M2M89_RS04495 yfhI 894897..896090 (+) 1194 WP_021481165.1 MFS transporter -
  M2M89_RS04500 sspK 896122..896274 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  M2M89_RS04505 yfhJ 896399..896668 (+) 270 WP_003243789.1 YfhJ family protein -
  M2M89_RS04510 yfhK 896813..897331 (+) 519 WP_085187167.1 SH3 domain-containing protein -
  M2M89_RS04515 spdL 897416..897733 (+) 318 WP_021481164.1 SdpC immunity protein SpdL -
  M2M89_RS04520 ephM 897735..898595 (+) 861 WP_085187170.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=687404 M2M89_RS04485 WP_029726844.1 893644..894438(+) (recX) [Bacillus subtilis strain S16]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=687404 M2M89_RS04485 WP_029726844.1 893644..894438(+) (recX) [Bacillus subtilis strain S16]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996