Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   OPM66_RS12935 Genome accession   NZ_CP112860
Coordinates   2715209..2716150 (-) Length   313 a.a.
NCBI ID   WP_001210787.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain EAB2     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2710209..2721150
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OPM66_RS12920 bauB 2712520..2713488 (-) 969 WP_001104139.1 siderophore-binding periplasmic lipoprotein BauB -
  OPM66_RS12925 bauE 2713495..2714265 (-) 771 WP_000582115.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  OPM66_RS12930 bauC 2714262..2715209 (-) 948 WP_001223274.1 ferric acinetobactin ABC transporter permease subunit BauC -
  OPM66_RS12935 ceuB 2715209..2716150 (-) 942 WP_001210787.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  OPM66_RS12940 - 2716150..2716281 (-) 132 WP_001218004.1 hypothetical protein -
  OPM66_RS12945 basB 2716782..2718812 (+) 2031 WP_000939834.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  OPM66_RS12950 basA 2718883..2720730 (-) 1848 WP_000910253.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 34037.17 Da        Isoelectric Point: 8.6941

>NTDB_id=686875 OPM66_RS12935 WP_001210787.1 2715209..2716150(-) (ceuB) [Acinetobacter baumannii strain EAB2]
MRFGLFCIFIILCICSLLLGAEQIQWSTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNMVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLICDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=686875 OPM66_RS12935 WP_001210787.1 2715209..2716150(-) (ceuB) [Acinetobacter baumannii strain EAB2]
ATGCGATTTGGCTTATTCTGTATTTTTATCATTTTATGTATTTGTTCGTTATTGCTGGGGGCTGAACAAATACAGTGGTC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATTCCTCGTTTAATTACTATTGTGCTTA
CCGGTATCGGGTTGGCGGTATGTGGCGTCATCTTGCAGCACATTGTGCGTAACAAGTTTGTTGAACCGGAAACTTCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCGTTAACTTTAGTTCCGGTAACCAGCACGCTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATCCGCCGGATCCGTTTTAGAAATATGGTTTTAG
TACCGGTAATTGGTTTGATGTACGGCAGTGTACTGAGCGCTTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGCCACTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTTGCACACCGCTTTACCGTGATTGGTATGGGTGAAGAGATGGCTTCTAGCCTAGGACTTA
GTTATGCAGCTATAGCCGCTATTGGTTTAATACTGGTTGCCATTACGGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTGCCCAATTTGGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCCATTGTGGC
TTTAGGTGGGGCGTCTCTATTACTGATTTGCGACATTCTTGGTCGCTCGATTATTTATCCATTTGAAGTGCCGATCGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.257

94.569

0.419