Detailed information NTG0068667

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: IGS56_RS02605
• Genome accession: NZ_AP022846
• Coordinates: 526933..527931 (-)
• Length: 332 a.a.
• NCBI ID: WP_005686992.1
• Uniprot ID: A0ABY1VT38
• Organism: Haemophilus influenzae strain TAMBA230
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 521933..532931

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IGS56_RS02580 (JPHIA_04870)	tehA	522907..523851 (+)	945	WP_071162914.1	dicarboxylate transporter/tellurite-resistance protein TehA	-
IGS56_RS02585 (JPHIA_04880)	tsaA	523904..524623 (-)	720	WP_071162913.1	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	-
IGS56_RS02590 (JPHIA_04890)	menA	524685..525596 (+)	912	WP_071162912.1	1,4-dihydroxy-2-naphthoate octaprenyltransferase	-
IGS56_RS02595 (JPHIA_04900)	rraA	525648..526136 (+)	489	WP_005649446.1	ribonuclease E activity regulator RraA	-
IGS56_RS02600 (JPHIA_04910)	-	526276..526827 (-)	552	WP_005649445.1	TIGR00645 family protein	-
IGS56_RS02605 (JPHIA_04920)	cytR	526933..527931 (-)	999	WP_005686992.1	substrate-binding domain-containing protein	Regulator
IGS56_RS02610 (JPHIA_04930)	rbsK	527959..528879 (-)	921	WP_071162911.1	ribokinase	-
IGS56_RS02615 (JPHIA_04940)	rbsB	528976..529854 (-)	879	WP_190811816.1	ribose ABC transporter substrate-binding protein RbsB	-
IGS56_RS02620 (JPHIA_04950)	rbsC	529874..530842 (-)	969	WP_071162909.1	ribose ABC transporter permease	-
IGS56_RS02625 (JPHIA_04960)	rbsA	530858..532339 (-)	1482	WP_190811817.1	ribose ABC transporter ATP-binding protein RbsA	-
IGS56_RS02630 (JPHIA_04970)	rbsD	532353..532772 (-)	420	WP_012055067.1	D-ribose pyranase	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 36749.46 Da
• Isoelectric Point: 7.9562

>NTDB_id=68667 IGS56_RS02605 WP_005686992.1 526933..527931(-) (cytR) [Haemophilus influenzae strain TAMBA230]
MATMKDIARLAQVSTSTVSHVINGSRFVSDEIREKVMRIVAELNYTPSAVARSLKVRETKTIGLLVTATNNPFFAEVMAG
VEQYCQKNQYNLIIATTGGDAKRLQQNLQTLMHKQVDGLLLMCGDSRFQADIELAISLPLVVMDWWFTELNADKILENSA
LGGYLATKALIDAGHRKIGIITGNLKKSVAQNRLQGYKNALSEAKIALNPHWIVESHFDFEGGVLGIQSLLTQSSRPTAV
FCCSDTIAVGAYQAIQQQGLRIPQDLSIMGYDDIELARYLSPPLSTICQPKAELGKLAVETLLQRIKNPNENYRTLVLEP
TCVLRESIYSFK

Nucleotide

• Length: 999 bp

>NTDB_id=68667 IGS56_RS02605 WP_005686992.1 526933..527931(-) (cytR) [Haemophilus influenzae strain TAMBA230]
ATGGCGACAATGAAAGATATTGCACGACTGGCGCAAGTTTCGACTTCCACAGTTTCACATGTCATTAATGGATCGCGTTT
TGTTAGCGATGAAATTCGTGAGAAAGTGATGCGTATTGTCGCTGAACTGAATTACACCCCCTCAGCTGTTGCACGAAGCC
TTAAGGTGCGCGAAACCAAAACTATCGGGCTACTTGTCACCGCAACAAATAATCCCTTCTTTGCGGAAGTGATGGCTGGC
GTGGAGCAATATTGTCAGAAAAATCAATATAATCTTATTATTGCTACAACGGGTGGAGATGCCAAACGCCTACAACAAAA
TCTGCAAACTCTAATGCACAAACAAGTGGATGGTTTGCTTTTGATGTGTGGTGATAGCCGTTTTCAGGCTGATATAGAGT
TAGCCATTTCGCTGCCACTGGTTGTGATGGACTGGTGGTTTACTGAGTTAAATGCAGATAAAATACTCGAAAATTCAGCA
CTTGGTGGCTATTTGGCGACAAAAGCATTAATCGATGCAGGACATCGTAAAATTGGCATTATTACGGGAAATCTCAAAAA
ATCTGTCGCACAAAATCGTTTGCAAGGTTATAAAAATGCGCTGTCGGAAGCAAAAATTGCGTTAAATCCTCATTGGATTG
TCGAAAGTCATTTTGACTTTGAAGGCGGTGTACTTGGCATACAATCTTTACTTACTCAATCTTCACGTCCAACAGCAGTT
TTTTGTTGTAGTGACACCATTGCTGTCGGTGCATACCAAGCTATTCAGCAACAAGGCTTACGTATTCCGCAAGATCTTTC
AATTATGGGCTATGATGACATTGAATTGGCTCGTTATCTCTCACCTCCCCTTTCCACCATTTGCCAACCGAAAGCTGAAC
TTGGCAAACTCGCTGTTGAAACACTATTGCAACGAATTAAAAATCCTAATGAAAATTACCGCACTTTGGTGTTAGAACCG
ACTTGTGTGTTAAGAGAGTCTATTTACAGTTTCAAATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-327)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	36.89	98.795	0.364
cytR	Vibrio cholerae C6706	36.585	98.795	0.361