Detailed information NTG0686209

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ORI87_RS21625
• Genome accession: NZ_CP111008
• Coordinates: 4440236..4441261 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain J53-p130
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4435236..4446261

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ORI87_RS21605 (ORI87_21605)	metJ	4436297..4436614 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ORI87_RS21610 (ORI87_21610)	yiiX	4436798..4437406 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
ORI87_RS21615 (ORI87_21615)	rpmE	4437467..4437679 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ORI87_RS21620 (ORI87_21620)	priA	4437882..4440080 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
ORI87_RS21625 (ORI87_21625)	cytR	4440236..4441261 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ORI87_RS21630 (ORI87_21630)	ftsN	4441353..4442312 (+)	960	WP_000068828.1	cell division protein FtsN	-
ORI87_RS21635 (ORI87_21635)	hslV	4442405..4442935 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ORI87_RS21640 (ORI87_21640)	hslU	4442945..4444276 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ORI87_RS21645 (ORI87_21645)	menA	4444343..4445269 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ORI87_RS21650 (ORI87_21650)	rraA	4445362..4445847 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ORI87_RS21655 (ORI87_21655)	zapB	4445932..4446177 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=686209 ORI87_RS21625 WP_000644904.1 4440236..4441261(+) (cytR) [Escherichia coli strain J53-p130]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=686209 ORI87_RS21625 WP_000644904.1 4440236..4441261(+) (cytR) [Escherichia coli strain J53-p130]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628