Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   M2923_RS03725 Genome accession   NZ_CP097008
Coordinates   779718..781391 (+) Length   557 a.a.
NCBI ID   WP_248857905.1    Uniprot ID   -
Organism   Enterococcus faecalis strain AT50     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 774718..786391
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M2923_RS03695 (M2923_03695) - 774969..775814 (+) 846 WP_002363394.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -
  M2923_RS03700 (M2923_03700) xseA 775824..777170 (+) 1347 WP_002355877.1 exodeoxyribonuclease VII large subunit -
  M2923_RS03705 (M2923_03705) - 777172..777402 (+) 231 WP_002355878.1 exodeoxyribonuclease VII small subunit -
  M2923_RS03710 (M2923_03710) - 777402..778283 (+) 882 WP_016622704.1 polyprenyl synthetase family protein -
  M2923_RS03715 (M2923_03715) - 778297..779112 (+) 816 WP_002363395.1 TlyA family RNA methyltransferase -
  M2923_RS03720 (M2923_03720) - 779251..779700 (+) 450 WP_002363397.1 ArgR family transcriptional regulator -
  M2923_RS03725 (M2923_03725) recN 779718..781391 (+) 1674 WP_248857905.1 DNA repair protein RecN Machinery gene
  M2923_RS03730 (M2923_03730) - 781482..781592 (-) 111 WP_002383399.1 DUF4044 domain-containing protein -
  M2923_RS03735 (M2923_03735) - 781660..782625 (-) 966 WP_002387038.1 magnesium transporter CorA family protein -
  M2923_RS03740 (M2923_03740) - 782870..783262 (+) 393 WP_002383401.1 DUF3397 domain-containing protein -
  M2923_RS03745 (M2923_03745) mraZ 783496..783981 (+) 486 WP_002383402.1 division/cell wall cluster transcriptional repressor MraZ -
  M2923_RS03750 (M2923_03750) rsmH 783996..784952 (+) 957 WP_002355891.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  M2923_RS03755 (M2923_03755) ftsL 784969..785376 (+) 408 WP_002358883.1 cell division protein FtsL -

Sequence

Protein


Download         Length: 557 a.a.        Molecular weight: 62640.10 Da        Isoelectric Point: 4.5967

>NTDB_id=686110 M2923_RS03725 WP_248857905.1 779718..781391(+) (recN) [Enterococcus faecalis strain AT50]
MLQELSVKNFAIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGGRGSSDYIRQGANKCTLEGLFSMPKSQELKQLL
EELGIETEEDSLVIQRDISASGKNVCRVNGRIVNITNLKRIGEYLVDIHGQNEHQELMQSERHIDMLDEFGGKKLLAVKE
KYTQAYQEYRALEAKVRKRQKNEKEFAQRMDMLHFQSDEIASAQLVAGEEEQLLEERNKLNNFQKIADALTISYAALNGE
DDSSLDKIGTSMNELASIESLDPEYKSLSDTVQNAYYLLQEASGDLSRLIDGLELDEGRLNEVENRLELIRQMKRKYGDS
IETILSYYEEITKELAEADFLEGGTGDLEALLAKKQQAAHQQALALRKERKRLAKELEQQILTELKELYLERTEFEVRFT
ELEHLQENGLDGVEFYITTNPGEPLKPLVRVASGGELSRVMLAMKTIFSQTQGITSIVFDEVDTGVSGRIAQAIADKIYQ
ISENSQVLCITHLPQVAAVADEHYFIEKEIVAGRTETSVRILSEKERVNEIARMLAGSEITKLTIEHAQELLAMAKK

Nucleotide


Download         Length: 1674 bp        

>NTDB_id=686110 M2923_RS03725 WP_248857905.1 779718..781391(+) (recN) [Enterococcus faecalis strain AT50]
ATGTTACAAGAACTTTCCGTGAAAAATTTTGCGATTATCTCTTCGTTACAATTAGAGTTTCAAATGGGTATGACCGTTTT
AACGGGAGAAACGGGTGCGGGGAAATCCATCATTATTGATGCAATGGGATTACTCACAGGCGGACGTGGCTCCAGTGACT
ATATTCGTCAAGGAGCAAATAAATGCACCTTAGAAGGACTTTTTTCAATGCCGAAAAGTCAAGAATTAAAGCAATTGTTA
GAAGAATTAGGTATTGAAACAGAAGAAGATTCTTTAGTGATTCAACGAGATATTTCCGCTTCTGGTAAAAATGTTTGCCG
TGTCAACGGACGGATTGTCAACATTACTAATTTAAAAAGAATTGGAGAATATTTAGTAGATATTCATGGCCAAAACGAAC
ATCAAGAATTGATGCAAAGTGAACGCCATATTGATATGTTAGATGAATTTGGTGGGAAAAAACTTTTAGCAGTCAAAGAA
AAATATACACAGGCGTATCAAGAGTATCGCGCACTCGAAGCCAAAGTCAGAAAGCGACAAAAAAATGAAAAAGAATTTGC
CCAAAGAATGGACATGCTTCATTTTCAAAGTGATGAAATTGCTAGTGCACAGTTAGTCGCTGGCGAAGAAGAACAATTGT
TAGAAGAACGCAATAAACTGAACAATTTTCAAAAGATTGCTGATGCACTGACGATTAGTTATGCCGCGCTAAATGGTGAA
GACGATAGTAGTTTGGATAAAATCGGAACAAGTATGAATGAACTCGCTTCGATTGAATCCCTTGATCCAGAATATAAATC
ATTGTCAGATACTGTTCAAAATGCTTACTATTTACTACAAGAAGCCAGTGGAGATCTTTCTAGGTTGATTGATGGCTTAG
AACTAGATGAAGGCCGCTTGAATGAAGTAGAAAATCGTTTGGAATTAATCCGTCAAATGAAACGTAAATATGGTGATTCG
ATCGAAACGATTTTATCTTACTATGAAGAAATTACCAAAGAGTTAGCAGAGGCTGATTTTTTGGAAGGTGGTACAGGCGA
CTTAGAAGCGTTGCTTGCAAAGAAACAACAAGCGGCTCATCAACAAGCATTAGCTTTACGAAAAGAACGAAAGCGCCTAG
CCAAAGAGCTTGAACAACAAATTTTAACCGAATTAAAAGAACTATATTTGGAGCGAACTGAATTTGAAGTCCGCTTTACA
GAACTTGAGCATTTACAAGAAAATGGCTTAGACGGAGTAGAATTTTATATTACTACTAACCCAGGGGAACCATTAAAACC
GTTAGTTCGGGTGGCTTCTGGCGGAGAACTTTCGCGAGTGATGTTGGCTATGAAAACAATCTTTTCTCAAACGCAAGGGA
TCACTAGTATTGTTTTTGATGAAGTGGATACAGGAGTCAGTGGCCGTATAGCACAGGCGATTGCCGATAAAATTTATCAA
ATTTCAGAAAATTCGCAGGTGTTGTGTATCACGCACTTGCCACAAGTGGCGGCCGTTGCCGATGAACATTATTTTATTGA
AAAAGAAATTGTGGCGGGTCGGACAGAAACAAGCGTCCGAATTTTATCTGAAAAAGAGCGAGTAAACGAAATTGCACGTA
TGCTCGCAGGAAGTGAAATTACGAAATTAACCATTGAACATGCACAAGAGCTGTTGGCGATGGCGAAAAAATAG

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-507)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

48.246

100

0.494